Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC18.38■□□□□ 0.53
SCN7AQ01118 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN7AQ01118 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SCN7AQ01118 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
SCN7AQ01118 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN7AQ01118 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCN7AQ01118 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCN7AQ01118 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN7AQ01118 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SCN7AQ01118 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.38■□□□□ 0.53
SCN7AQ01118 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
SCN7AQ01118 SSR4P1-203ENST00000599569 2260 ntBASIC18.38■□□□□ 0.53
SCN7AQ01118 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.38■□□□□ 0.53
SCN7AQ01118 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCN7AQ01118 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN7AQ01118 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN7AQ01118 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN7AQ01118 HIST2H2BA-201ENST00000412169 381 ntBASIC18.38■□□□□ 0.53
SCN7AQ01118 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC18.38■□□□□ 0.53
SCN7AQ01118 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN7AQ01118 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
SCN7AQ01118 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC18.38■□□□□ 0.53
SCN7AQ01118 SIGLEC18P-201ENST00000602271 909 ntBASIC18.38■□□□□ 0.53
SCN7AQ01118 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN7AQ01118 AC127024.7-201ENST00000625101 200 ntBASIC18.38■□□□□ 0.53
SCN7AQ01118 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SCN7AQ01118 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN7AQ01118 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC18.37■□□□□ 0.53
SCN7AQ01118 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC18.37■□□□□ 0.53
SCN7AQ01118 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN7AQ01118 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SCN7AQ01118 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC18.37■□□□□ 0.53
SCN7AQ01118 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SCN7AQ01118 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCN7AQ01118 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN7AQ01118 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.37■□□□□ 0.53
SCN7AQ01118 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.37■□□□□ 0.53
SCN7AQ01118 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN7AQ01118 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCN7AQ01118 MRPL37P1-201ENST00000592451 1337 ntBASIC18.37■□□□□ 0.53
SCN7AQ01118 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN7AQ01118 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCN7AQ01118 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCN7AQ01118 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN7AQ01118 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SCN7AQ01118 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SCN7AQ01118 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC18.37■□□□□ 0.53
SCN7AQ01118 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC18.37■□□□□ 0.53
SCN7AQ01118 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SCN7AQ01118 MIR5196-201ENST00000578146 115 ntBASIC18.37■□□□□ 0.53
SCN7AQ01118 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC18.37■□□□□ 0.53
SCN7AQ01118 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC18.37■□□□□ 0.53
SCN7AQ01118 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCN7AQ01118 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SCN7AQ01118 AL136172.1-201ENST00000598590 1394 ntBASIC18.37■□□□□ 0.53
SCN7AQ01118 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCN7AQ01118 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC18.36■□□□□ 0.53
SCN7AQ01118 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCN7AQ01118 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.36■□□□□ 0.53
SCN7AQ01118 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCN7AQ01118 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCN7AQ01118 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCN7AQ01118 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC18.36■□□□□ 0.53
SCN7AQ01118 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCN7AQ01118 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC18.36■□□□□ 0.53
SCN7AQ01118 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC18.36■□□□□ 0.53
SCN7AQ01118 LINC01815-202ENST00000641468 1409 ntBASIC18.36■□□□□ 0.53
SCN7AQ01118 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC18.36■□□□□ 0.53
SCN7AQ01118 MIR645-201ENST00000385283 94 ntBASIC18.36■□□□□ 0.53
SCN7AQ01118 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC18.36■□□□□ 0.53
SCN7AQ01118 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC18.36■□□□□ 0.53
SCN7AQ01118 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SCN7AQ01118 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC18.36■□□□□ 0.53
SCN7AQ01118 RHEB-207ENST00000496004 744 ntTSL 2 BASIC18.36■□□□□ 0.53
SCN7AQ01118 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SCN7AQ01118 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCN7AQ01118 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC18.36■□□□□ 0.53
SCN7AQ01118 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC18.36■□□□□ 0.53
SCN7AQ01118 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCN7AQ01118 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCN7AQ01118 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCN7AQ01118 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.36■□□□□ 0.53
SCN7AQ01118 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCN7AQ01118 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCN7AQ01118 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.36■□□□□ 0.53
SCN7AQ01118 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.36■□□□□ 0.53
SCN7AQ01118 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SCN7AQ01118 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCN7AQ01118 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN7AQ01118 AC139712.1-201ENST00000378256 1875 ntBASIC18.35■□□□□ 0.53
SCN7AQ01118 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN7AQ01118 HLA-DQB1-202ENST00000399079 1501 ntBASIC18.35■□□□□ 0.53
SCN7AQ01118 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN7AQ01118 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCN7AQ01118 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCN7AQ01118 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN7AQ01118 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SCN7AQ01118 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN7AQ01118 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC18.35■□□□□ 0.53
SCN7AQ01118 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms