Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
EFNB1P98172 CICP16-201ENST00000502609 2813 ntBASIC13.55□□□□□ -0.24
EFNB1P98172 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
EFNB1P98172 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
EFNB1P98172 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
EFNB1P98172 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.55□□□□□ -0.24
EFNB1P98172 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
EFNB1P98172 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
EFNB1P98172 DRD5P1-201ENST00000456605 1438 ntBASIC13.55□□□□□ -0.24
EFNB1P98172 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
EFNB1P98172 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
EFNB1P98172 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
EFNB1P98172 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.54□□□□□ -0.24
EFNB1P98172 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
EFNB1P98172 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
EFNB1P98172 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
EFNB1P98172 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.54□□□□□ -0.24
EFNB1P98172 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
EFNB1P98172 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
EFNB1P98172 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
EFNB1P98172 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
EFNB1P98172 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
EFNB1P98172 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
EFNB1P98172 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
EFNB1P98172 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.54□□□□□ -0.24
EFNB1P98172 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
EFNB1P98172 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
EFNB1P98172 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
EFNB1P98172 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
EFNB1P98172 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
EFNB1P98172 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.54□□□□□ -0.24
EFNB1P98172 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
EFNB1P98172 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.54□□□□□ -0.24
EFNB1P98172 DNAJB3-201ENST00000446806 729 ntBASIC13.54□□□□□ -0.24
EFNB1P98172 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.54□□□□□ -0.24
EFNB1P98172 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.54□□□□□ -0.24
EFNB1P98172 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.54□□□□□ -0.24
EFNB1P98172 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
EFNB1P98172 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
EFNB1P98172 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.54□□□□□ -0.24
EFNB1P98172 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.54□□□□□ -0.24
EFNB1P98172 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.54□□□□□ -0.24
EFNB1P98172 PRSS30P-206ENST00000641773 873 ntBASIC13.54□□□□□ -0.24
EFNB1P98172 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.54□□□□□ -0.24
EFNB1P98172 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
EFNB1P98172 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
EFNB1P98172 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
EFNB1P98172 AC130686.1-201ENST00000622936 2466 ntBASIC13.54□□□□□ -0.24
EFNB1P98172 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
EFNB1P98172 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.54□□□□□ -0.24
EFNB1P98172 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
EFNB1P98172 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
EFNB1P98172 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
EFNB1P98172 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.54□□□□□ -0.24
EFNB1P98172 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
EFNB1P98172 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
EFNB1P98172 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
EFNB1P98172 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
EFNB1P98172 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
EFNB1P98172 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNB1P98172 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
EFNB1P98172 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNB1P98172 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNB1P98172 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.53□□□□□ -0.24
EFNB1P98172 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
EFNB1P98172 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.53□□□□□ -0.24
EFNB1P98172 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.53□□□□□ -0.24
EFNB1P98172 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNB1P98172 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNB1P98172 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.53□□□□□ -0.24
EFNB1P98172 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNB1P98172 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
EFNB1P98172 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
EFNB1P98172 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNB1P98172 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.53□□□□□ -0.24
EFNB1P98172 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.53□□□□□ -0.24
EFNB1P98172 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.53□□□□□ -0.24
EFNB1P98172 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.53□□□□□ -0.24
EFNB1P98172 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.53□□□□□ -0.24
EFNB1P98172 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
EFNB1P98172 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.53□□□□□ -0.24
EFNB1P98172 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.53□□□□□ -0.24
EFNB1P98172 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.53□□□□□ -0.24
EFNB1P98172 AC044860.1-202ENST00000559481 777 ntBASIC13.53□□□□□ -0.24
EFNB1P98172 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.53□□□□□ -0.24
EFNB1P98172 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
EFNB1P98172 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.53□□□□□ -0.24
EFNB1P98172 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
EFNB1P98172 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNB1P98172 AL158212.4-201ENST00000624062 1286 ntBASIC13.53□□□□□ -0.24
EFNB1P98172 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.53□□□□□ -0.24
EFNB1P98172 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
EFNB1P98172 AC087499.5-201ENST00000452760 1342 ntBASIC13.53□□□□□ -0.24
EFNB1P98172 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.53□□□□□ -0.24
EFNB1P98172 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
EFNB1P98172 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
EFNB1P98172 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
EFNB1P98172 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
EFNB1P98172 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.53□□□□□ -0.24
EFNB1P98172 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms