Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.68□□□□□ -0.22
VBP1P61758 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VBP1P61758 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.68□□□□□ -0.22
VBP1P61758 MIR497HG-202ENST00000572453 3838 ntBASIC13.68□□□□□ -0.22
VBP1P61758 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
VBP1P61758 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.68□□□□□ -0.22
VBP1P61758 AL121956.5-201ENST00000625261 221 ntBASIC13.68□□□□□ -0.22
VBP1P61758 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.68□□□□□ -0.22
VBP1P61758 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.68□□□□□ -0.22
VBP1P61758 AC107918.4-202ENST00000641623 219 ntBASIC13.68□□□□□ -0.22
VBP1P61758 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
VBP1P61758 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.68□□□□□ -0.22
VBP1P61758 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
VBP1P61758 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VBP1P61758 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
VBP1P61758 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VBP1P61758 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
VBP1P61758 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VBP1P61758 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
VBP1P61758 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.68□□□□□ -0.22
VBP1P61758 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VBP1P61758 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VBP1P61758 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VBP1P61758 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VBP1P61758 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
VBP1P61758 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
VBP1P61758 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VBP1P61758 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VBP1P61758 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
VBP1P61758 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
VBP1P61758 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VBP1P61758 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VBP1P61758 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
VBP1P61758 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
VBP1P61758 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
VBP1P61758 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VBP1P61758 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VBP1P61758 AC007787.1-201ENST00000588095 1583 ntBASIC13.67□□□□□ -0.22
VBP1P61758 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.67□□□□□ -0.22
VBP1P61758 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VBP1P61758 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VBP1P61758 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
VBP1P61758 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VBP1P61758 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VBP1P61758 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
VBP1P61758 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VBP1P61758 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
VBP1P61758 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
VBP1P61758 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
VBP1P61758 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VBP1P61758 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.67□□□□□ -0.22
VBP1P61758 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
VBP1P61758 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.67□□□□□ -0.22
VBP1P61758 AC092474.2-201ENST00000424288 719 ntBASIC13.67□□□□□ -0.22
VBP1P61758 AC022447.6-201ENST00000515522 438 ntBASIC13.67□□□□□ -0.22
VBP1P61758 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.67□□□□□ -0.22
VBP1P61758 AC024267.1-201ENST00000582320 895 ntBASIC13.67□□□□□ -0.22
VBP1P61758 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.67□□□□□ -0.22
VBP1P61758 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VBP1P61758 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
VBP1P61758 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.67□□□□□ -0.22
VBP1P61758 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.67□□□□□ -0.22
VBP1P61758 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VBP1P61758 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VBP1P61758 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.67□□□□□ -0.22
VBP1P61758 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.67□□□□□ -0.22
VBP1P61758 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VBP1P61758 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.67□□□□□ -0.22
VBP1P61758 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VBP1P61758 INE2-201ENST00000630399 1874 ntBASIC13.67□□□□□ -0.22
VBP1P61758 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
VBP1P61758 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
VBP1P61758 AC068760.1-201ENST00000493579 1953 ntBASIC13.67□□□□□ -0.22
VBP1P61758 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
VBP1P61758 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VBP1P61758 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VBP1P61758 AC012508.2-201ENST00000567613 1472 ntBASIC13.67□□□□□ -0.22
VBP1P61758 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VBP1P61758 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
VBP1P61758 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
VBP1P61758 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VBP1P61758 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VBP1P61758 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
VBP1P61758 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.66□□□□□ -0.22
VBP1P61758 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VBP1P61758 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VBP1P61758 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VBP1P61758 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VBP1P61758 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VBP1P61758 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VBP1P61758 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VBP1P61758 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VBP1P61758 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VBP1P61758 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.66□□□□□ -0.22
VBP1P61758 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VBP1P61758 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.66□□□□□ -0.22
VBP1P61758 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
VBP1P61758 AL596275.1-201ENST00000423464 877 ntBASIC13.66□□□□□ -0.22
VBP1P61758 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.66□□□□□ -0.22
VBP1P61758 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms