Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC19.81■□□□□ 0.76
RIPK4P57078 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIPK4P57078 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC19.81■□□□□ 0.76
RIPK4P57078 AP002414.2-201ENST00000591780 3365 ntBASIC19.81■□□□□ 0.76
RIPK4P57078 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC19.81■□□□□ 0.76
RIPK4P57078 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIPK4P57078 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
RIPK4P57078 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
RIPK4P57078 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC19.81■□□□□ 0.76
RIPK4P57078 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC19.81■□□□□ 0.76
RIPK4P57078 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC19.81■□□□□ 0.76
RIPK4P57078 MESTP3-201ENST00000503460 968 ntBASIC19.81■□□□□ 0.76
RIPK4P57078 AP003171.2-201ENST00000528208 925 ntBASIC19.81■□□□□ 0.76
RIPK4P57078 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RIPK4P57078 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC19.81■□□□□ 0.76
RIPK4P57078 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RIPK4P57078 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC19.81■□□□□ 0.76
RIPK4P57078 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIPK4P57078 AC138466.3-201ENST00000619983 221 ntBASIC19.81■□□□□ 0.76
RIPK4P57078 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC19.81■□□□□ 0.76
RIPK4P57078 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIPK4P57078 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIPK4P57078 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RIPK4P57078 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC19.81■□□□□ 0.76
RIPK4P57078 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIPK4P57078 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIPK4P57078 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIPK4P57078 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIPK4P57078 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC19.81■□□□□ 0.76
RIPK4P57078 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC19.81■□□□□ 0.76
RIPK4P57078 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC19.81■□□□□ 0.76
RIPK4P57078 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC19.81■□□□□ 0.76
RIPK4P57078 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIPK4P57078 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIPK4P57078 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RIPK4P57078 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RIPK4P57078 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC19.8■□□□□ 0.76
RIPK4P57078 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RIPK4P57078 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC19.8■□□□□ 0.76
RIPK4P57078 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RIPK4P57078 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RIPK4P57078 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RIPK4P57078 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RIPK4P57078 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RIPK4P57078 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RIPK4P57078 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RIPK4P57078 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.8■□□□□ 0.76
RIPK4P57078 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC19.8■□□□□ 0.76
RIPK4P57078 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RIPK4P57078 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC19.8■□□□□ 0.76
RIPK4P57078 FAM8A4P-201ENST00000435433 1213 ntBASIC19.8■□□□□ 0.76
RIPK4P57078 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC19.8■□□□□ 0.76
RIPK4P57078 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC19.8■□□□□ 0.76
RIPK4P57078 AL583810.1-201ENST00000553344 1045 ntBASIC19.8■□□□□ 0.76
RIPK4P57078 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC19.8■□□□□ 0.76
RIPK4P57078 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RIPK4P57078 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RIPK4P57078 AL354989.2-201ENST00000435838 1540 ntBASIC19.8■□□□□ 0.76
RIPK4P57078 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RIPK4P57078 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RIPK4P57078 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC19.8■□□□□ 0.76
RIPK4P57078 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RIPK4P57078 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RIPK4P57078 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC19.8■□□□□ 0.76
RIPK4P57078 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RIPK4P57078 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RIPK4P57078 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RIPK4P57078 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RIPK4P57078 INE2-201ENST00000630399 1874 ntBASIC19.79■□□□□ 0.76
RIPK4P57078 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC19.79■□□□□ 0.76
RIPK4P57078 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RIPK4P57078 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RIPK4P57078 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC19.79■□□□□ 0.76
RIPK4P57078 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RIPK4P57078 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RIPK4P57078 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RIPK4P57078 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RIPK4P57078 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RIPK4P57078 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RIPK4P57078 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC19.79■□□□□ 0.76
RIPK4P57078 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC19.79■□□□□ 0.76
RIPK4P57078 AL391280.1-201ENST00000506969 1062 ntBASIC19.79■□□□□ 0.76
RIPK4P57078 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RIPK4P57078 AC023310.1-201ENST00000554836 735 ntBASIC19.79■□□□□ 0.76
RIPK4P57078 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC19.79■□□□□ 0.76
RIPK4P57078 HNRNPA1P48-202ENST00000565308 961 ntBASIC19.79■□□□□ 0.76
RIPK4P57078 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC19.79■□□□□ 0.76
RIPK4P57078 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RIPK4P57078 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RIPK4P57078 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
RIPK4P57078 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC19.79■□□□□ 0.76
RIPK4P57078 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RIPK4P57078 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RIPK4P57078 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RIPK4P57078 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RIPK4P57078 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RIPK4P57078 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RIPK4P57078 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RIPK4P57078 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RIPK4P57078 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms