Protein–RNA interactions for Protein: P56915

GSC, Homeobox protein goosecoid, humanhuman

Predicted RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSCP56915 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
GSCP56915 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GSCP56915 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GSCP56915 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GSCP56915 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.06■□□□□ 0.16
GSCP56915 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GSCP56915 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
GSCP56915 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GSCP56915 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
GSCP56915 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.06■□□□□ 0.16
GSCP56915 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
GSCP56915 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
GSCP56915 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GSCP56915 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GSCP56915 AC007541.1-201ENST00000570282 1469 ntBASIC16.06■□□□□ 0.16
GSCP56915 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GSCP56915 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GSCP56915 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GSCP56915 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.06■□□□□ 0.16
GSCP56915 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GSCP56915 C1QBPP1-201ENST00000400117 770 ntBASIC16.06■□□□□ 0.16
GSCP56915 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.06■□□□□ 0.16
GSCP56915 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
GSCP56915 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.06■□□□□ 0.16
GSCP56915 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.06■□□□□ 0.16
GSCP56915 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.06■□□□□ 0.16
GSCP56915 CHCHD2P3-201ENST00000603038 451 ntBASIC16.06■□□□□ 0.16
GSCP56915 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.06■□□□□ 0.16
GSCP56915 AL355385.1-201ENST00000606123 409 ntBASIC16.06■□□□□ 0.16
GSCP56915 AC004233.3-201ENST00000607794 1269 ntBASIC16.06■□□□□ 0.16
GSCP56915 BX539320.1-201ENST00000623759 877 ntBASIC16.06■□□□□ 0.16
GSCP56915 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GSCP56915 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
GSCP56915 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
GSCP56915 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GSCP56915 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
GSCP56915 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.06■□□□□ 0.16
GSCP56915 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.06■□□□□ 0.16
GSCP56915 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GSCP56915 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.06■□□□□ 0.16
GSCP56915 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GSCP56915 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
GSCP56915 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GSCP56915 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
GSCP56915 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GSCP56915 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GSCP56915 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GSCP56915 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
GSCP56915 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GSCP56915 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
GSCP56915 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GSCP56915 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.05■□□□□ 0.16
GSCP56915 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GSCP56915 KRT8P14-201ENST00000414254 1442 ntBASIC16.05■□□□□ 0.16
GSCP56915 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
GSCP56915 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
GSCP56915 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GSCP56915 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.05■□□□□ 0.16
GSCP56915 Z82170.1-201ENST00000625081 3192 ntBASIC16.05■□□□□ 0.16
GSCP56915 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GSCP56915 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GSCP56915 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
GSCP56915 AC236430.1-201ENST00000402231 743 ntBASIC16.05■□□□□ 0.16
GSCP56915 PIN1P1-201ENST00000412108 996 ntBASIC16.05■□□□□ 0.16
GSCP56915 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.05■□□□□ 0.16
GSCP56915 ELK1P1-201ENST00000485699 580 ntBASIC16.05■□□□□ 0.16
GSCP56915 AL359711.2-201ENST00000563105 872 ntBASIC16.05■□□□□ 0.16
GSCP56915 DUX4L47-201ENST00000566374 394 ntBASIC16.05■□□□□ 0.16
GSCP56915 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.05■□□□□ 0.16
GSCP56915 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.05■□□□□ 0.16
GSCP56915 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
GSCP56915 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GSCP56915 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GSCP56915 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GSCP56915 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
GSCP56915 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.05■□□□□ 0.16
GSCP56915 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC16.05■□□□□ 0.16
GSCP56915 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GSCP56915 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
GSCP56915 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GSCP56915 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GSCP56915 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GSCP56915 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC16.05■□□□□ 0.16
GSCP56915 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GSCP56915 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GSCP56915 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
GSCP56915 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.04■□□□□ 0.16
GSCP56915 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.04■□□□□ 0.16
GSCP56915 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GSCP56915 AL157414.3-201ENST00000624276 1954 ntBASIC16.04■□□□□ 0.16
GSCP56915 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.04■□□□□ 0.16
GSCP56915 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GSCP56915 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GSCP56915 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GSCP56915 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.04■□□□□ 0.16
GSCP56915 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GSCP56915 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.04■□□□□ 0.16
GSCP56915 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
GSCP56915 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GSCP56915 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms