Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CLDN6P56747 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC14.54□□□□□ -0.08
CLDN6P56747 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CLDN6P56747 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.54□□□□□ -0.08
CLDN6P56747 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN6P56747 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC14.54□□□□□ -0.08
CLDN6P56747 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.54□□□□□ -0.08
CLDN6P56747 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.54□□□□□ -0.08
CLDN6P56747 BNIP3P13-201ENST00000599968 566 ntBASIC14.54□□□□□ -0.08
CLDN6P56747 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN6P56747 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN6P56747 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN6P56747 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC14.54□□□□□ -0.08
CLDN6P56747 AC004923.1-202ENST00000642106 209 ntBASIC14.54□□□□□ -0.08
CLDN6P56747 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN6P56747 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN6P56747 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN6P56747 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN6P56747 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.54□□□□□ -0.08
CLDN6P56747 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN6P56747 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN6P56747 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CLDN6P56747 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CLDN6P56747 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN6P56747 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CLDN6P56747 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN6P56747 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CLDN6P56747 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN6P56747 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN6P56747 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN6P56747 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN6P56747 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN6P56747 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN6P56747 AL596257.1-201ENST00000641463 2694 ntBASIC14.53□□□□□ -0.08
CLDN6P56747 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN6P56747 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.53□□□□□ -0.08
CLDN6P56747 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CLDN6P56747 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.53□□□□□ -0.08
CLDN6P56747 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN6P56747 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.53□□□□□ -0.08
CLDN6P56747 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN6P56747 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN6P56747 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN6P56747 AC069224.1-201ENST00000566372 1715 ntBASIC14.53□□□□□ -0.08
CLDN6P56747 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN6P56747 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN6P56747 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN6P56747 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CLDN6P56747 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN6P56747 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN6P56747 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.53□□□□□ -0.08
CLDN6P56747 MAGEA5-201ENST00000446757 942 ntBASIC14.53□□□□□ -0.08
CLDN6P56747 AC106794.1-201ENST00000506935 792 ntBASIC14.53□□□□□ -0.08
CLDN6P56747 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.53□□□□□ -0.08
CLDN6P56747 AC116345.2-201ENST00000512837 523 ntBASIC14.53□□□□□ -0.08
CLDN6P56747 AC022616.1-201ENST00000518688 554 ntBASIC14.53□□□□□ -0.08
CLDN6P56747 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.53□□□□□ -0.08
CLDN6P56747 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.53□□□□□ -0.08
CLDN6P56747 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.53□□□□□ -0.08
CLDN6P56747 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
CLDN6P56747 AC103988.2-201ENST00000561804 725 ntBASIC14.53□□□□□ -0.08
CLDN6P56747 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC14.53□□□□□ -0.08
CLDN6P56747 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.53□□□□□ -0.08
CLDN6P56747 AC138466.3-201ENST00000619983 221 ntBASIC14.53□□□□□ -0.08
CLDN6P56747 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN6P56747 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.53□□□□□ -0.08
CLDN6P56747 AL805961.1-203ENST00000641078 1258 ntBASIC14.53□□□□□ -0.08
CLDN6P56747 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CLDN6P56747 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN6P56747 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CLDN6P56747 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.53□□□□□ -0.08
CLDN6P56747 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN6P56747 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CLDN6P56747 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CLDN6P56747 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CLDN6P56747 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.53□□□□□ -0.08
CLDN6P56747 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN6P56747 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN6P56747 AC092127.1-201ENST00000567093 3455 ntBASIC14.53□□□□□ -0.08
CLDN6P56747 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN6P56747 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN6P56747 NORAD-201ENST00000565493 5339 ntBASIC14.52□□□□□ -0.08
CLDN6P56747 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN6P56747 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN6P56747 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN6P56747 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN6P56747 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN6P56747 AC084364.1-201ENST00000551967 1556 ntBASIC14.52□□□□□ -0.08
CLDN6P56747 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.52□□□□□ -0.08
CLDN6P56747 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.52□□□□□ -0.08
CLDN6P56747 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN6P56747 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CLDN6P56747 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN6P56747 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.52□□□□□ -0.09
CLDN6P56747 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.52□□□□□ -0.09
CLDN6P56747 AC234782.1-201ENST00000451950 919 ntBASIC14.52□□□□□ -0.09
CLDN6P56747 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.52□□□□□ -0.09
CLDN6P56747 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.52□□□□□ -0.09
CLDN6P56747 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.52□□□□□ -0.09
CLDN6P56747 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms