Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
WNT3AP56704 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
WNT3AP56704 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
WNT3AP56704 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
WNT3AP56704 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
WNT3AP56704 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
WNT3AP56704 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
WNT3AP56704 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.34■□□□□ 0.05
WNT3AP56704 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
WNT3AP56704 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
WNT3AP56704 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
WNT3AP56704 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
WNT3AP56704 AC018529.2-202ENST00000611482 3087 ntBASIC15.34■□□□□ 0.05
WNT3AP56704 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
WNT3AP56704 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
WNT3AP56704 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
WNT3AP56704 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.34■□□□□ 0.05
WNT3AP56704 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.34■□□□□ 0.05
WNT3AP56704 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
WNT3AP56704 AP006294.1-201ENST00000415407 339 ntBASIC15.34■□□□□ 0.05
WNT3AP56704 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.34■□□□□ 0.05
WNT3AP56704 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.34■□□□□ 0.05
WNT3AP56704 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
WNT3AP56704 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.34■□□□□ 0.05
WNT3AP56704 DUX4L47-201ENST00000566374 394 ntBASIC15.34■□□□□ 0.05
WNT3AP56704 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.34■□□□□ 0.05
WNT3AP56704 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.34■□□□□ 0.05
WNT3AP56704 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
WNT3AP56704 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.34■□□□□ 0.05
WNT3AP56704 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
WNT3AP56704 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
WNT3AP56704 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
WNT3AP56704 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
WNT3AP56704 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
WNT3AP56704 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
WNT3AP56704 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
WNT3AP56704 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
WNT3AP56704 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
WNT3AP56704 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
WNT3AP56704 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
WNT3AP56704 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
WNT3AP56704 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
WNT3AP56704 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
WNT3AP56704 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.33■□□□□ 0.05
WNT3AP56704 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
WNT3AP56704 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
WNT3AP56704 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
WNT3AP56704 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.33■□□□□ 0.05
WNT3AP56704 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
WNT3AP56704 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
WNT3AP56704 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
WNT3AP56704 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
WNT3AP56704 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
WNT3AP56704 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.33■□□□□ 0.04
WNT3AP56704 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
WNT3AP56704 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
WNT3AP56704 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
WNT3AP56704 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.33■□□□□ 0.04
WNT3AP56704 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
WNT3AP56704 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
WNT3AP56704 AC018442.1-201ENST00000421439 2061 ntBASIC15.33■□□□□ 0.04
WNT3AP56704 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
WNT3AP56704 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
WNT3AP56704 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
WNT3AP56704 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.33■□□□□ 0.04
WNT3AP56704 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
WNT3AP56704 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
WNT3AP56704 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.33■□□□□ 0.04
WNT3AP56704 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.33■□□□□ 0.04
WNT3AP56704 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
WNT3AP56704 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.33■□□□□ 0.04
WNT3AP56704 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.33■□□□□ 0.04
WNT3AP56704 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
WNT3AP56704 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
WNT3AP56704 RPSAP52-203ENST00000622976 1023 ntBASIC15.33■□□□□ 0.04
WNT3AP56704 AC023090.2-201ENST00000625182 2110 ntBASIC15.33■□□□□ 0.04
WNT3AP56704 AC025048.6-201ENST00000634326 1161 ntBASIC15.33■□□□□ 0.04
WNT3AP56704 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
WNT3AP56704 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.33■□□□□ 0.04
WNT3AP56704 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.33■□□□□ 0.04
WNT3AP56704 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
WNT3AP56704 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
WNT3AP56704 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.33■□□□□ 0.04
WNT3AP56704 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
WNT3AP56704 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
WNT3AP56704 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
WNT3AP56704 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
WNT3AP56704 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
WNT3AP56704 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
WNT3AP56704 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
WNT3AP56704 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.33■□□□□ 0.04
WNT3AP56704 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
WNT3AP56704 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
WNT3AP56704 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.33■□□□□ 0.04
WNT3AP56704 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
WNT3AP56704 AL390755.1-201ENST00000623716 2027 ntBASIC15.33■□□□□ 0.04
WNT3AP56704 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
WNT3AP56704 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
WNT3AP56704 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
WNT3AP56704 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms