Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.5□□□□□ -0.25
SLC25A1P53007 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.5□□□□□ -0.25
SLC25A1P53007 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.5□□□□□ -0.25
SLC25A1P53007 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.5□□□□□ -0.25
SLC25A1P53007 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
SLC25A1P53007 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.5□□□□□ -0.25
SLC25A1P53007 AC022447.6-201ENST00000515522 438 ntBASIC13.5□□□□□ -0.25
SLC25A1P53007 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.5□□□□□ -0.25
SLC25A1P53007 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.5□□□□□ -0.25
SLC25A1P53007 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.5□□□□□ -0.25
SLC25A1P53007 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SLC25A1P53007 AL691403.2-201ENST00000618460 490 ntBASIC13.5□□□□□ -0.25
SLC25A1P53007 AC139530.3-201ENST00000620344 690 ntBASIC13.5□□□□□ -0.25
SLC25A1P53007 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC25A1P53007 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SLC25A1P53007 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC25A1P53007 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC25A1P53007 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.5□□□□□ -0.25
SLC25A1P53007 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
SLC25A1P53007 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.5□□□□□ -0.25
SLC25A1P53007 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SLC25A1P53007 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.5□□□□□ -0.25
SLC25A1P53007 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SLC25A1P53007 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.5□□□□□ -0.25
SLC25A1P53007 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC25A1P53007 AC027601.5-201ENST00000624065 2482 ntBASIC13.5□□□□□ -0.25
SLC25A1P53007 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SLC25A1P53007 AC139749.1-202ENST00000617529 3139 ntBASIC13.5□□□□□ -0.25
SLC25A1P53007 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC25A1P53007 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
SLC25A1P53007 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.5□□□□□ -0.25
SLC25A1P53007 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC25A1P53007 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SLC25A1P53007 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.49□□□□□ -0.25
SLC25A1P53007 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SLC25A1P53007 AC136759.1-202ENST00000530858 2194 ntBASIC13.49□□□□□ -0.25
SLC25A1P53007 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC25A1P53007 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC25A1P53007 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
SLC25A1P53007 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SLC25A1P53007 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.49□□□□□ -0.25
SLC25A1P53007 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.49□□□□□ -0.25
SLC25A1P53007 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC25A1P53007 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC25A1P53007 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC25A1P53007 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC25A1P53007 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SLC25A1P53007 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SLC25A1P53007 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC25A1P53007 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SLC25A1P53007 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SLC25A1P53007 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC25A1P53007 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC25A1P53007 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SLC25A1P53007 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.49□□□□□ -0.25
SLC25A1P53007 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.49□□□□□ -0.25
SLC25A1P53007 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.49□□□□□ -0.25
SLC25A1P53007 AL589987.1-201ENST00000453380 819 ntBASIC13.49□□□□□ -0.25
SLC25A1P53007 RPL13AP25-201ENST00000484130 612 ntBASIC13.49□□□□□ -0.25
SLC25A1P53007 AC135586.1-201ENST00000539323 574 ntBASIC13.49□□□□□ -0.25
SLC25A1P53007 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.49□□□□□ -0.25
SLC25A1P53007 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.49□□□□□ -0.25
SLC25A1P53007 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.49□□□□□ -0.25
SLC25A1P53007 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.49□□□□□ -0.25
SLC25A1P53007 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
SLC25A1P53007 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
SLC25A1P53007 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.49□□□□□ -0.25
SLC25A1P53007 AC093813.1-201ENST00000605066 256 ntBASIC13.49□□□□□ -0.25
SLC25A1P53007 GPALPP1-207ENST00000611650 899 ntBASIC13.49□□□□□ -0.25
SLC25A1P53007 AC006538.3-201ENST00000612495 578 ntBASIC13.49□□□□□ -0.25
SLC25A1P53007 AC093028.1-201ENST00000622998 982 ntBASIC13.49□□□□□ -0.25
SLC25A1P53007 PRSS30P-206ENST00000641773 873 ntBASIC13.49□□□□□ -0.25
SLC25A1P53007 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SLC25A1P53007 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SLC25A1P53007 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
SLC25A1P53007 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.49□□□□□ -0.25
SLC25A1P53007 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC25A1P53007 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC25A1P53007 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC25A1P53007 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SLC25A1P53007 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC25A1P53007 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SLC25A1P53007 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SLC25A1P53007 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC25A1P53007 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SLC25A1P53007 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC25A1P53007 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC25A1P53007 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.49□□□□□ -0.25
SLC25A1P53007 AC152010.1-201ENST00000415779 2006 ntBASIC13.49□□□□□ -0.25
SLC25A1P53007 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.49□□□□□ -0.25
SLC25A1P53007 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.49□□□□□ -0.25
SLC25A1P53007 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.49□□□□□ -0.25
SLC25A1P53007 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.49□□□□□ -0.25
SLC25A1P53007 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.49□□□□□ -0.25
SLC25A1P53007 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC25A1P53007 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.48□□□□□ -0.25
SLC25A1P53007 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SLC25A1P53007 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC25A1P53007 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC25A1P53007 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms