Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
EFNA3P52797 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.2□□□□□ -0.14
EFNA3P52797 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.2□□□□□ -0.14
EFNA3P52797 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.2□□□□□ -0.14
EFNA3P52797 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.2□□□□□ -0.14
EFNA3P52797 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.2□□□□□ -0.14
EFNA3P52797 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.2□□□□□ -0.14
EFNA3P52797 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNA3P52797 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.2□□□□□ -0.14
EFNA3P52797 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.2□□□□□ -0.14
EFNA3P52797 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.2□□□□□ -0.14
EFNA3P52797 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.2□□□□□ -0.14
EFNA3P52797 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.2□□□□□ -0.14
EFNA3P52797 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.2□□□□□ -0.14
EFNA3P52797 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
EFNA3P52797 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNA3P52797 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.2□□□□□ -0.14
EFNA3P52797 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNA3P52797 LINC00554-201ENST00000564841 3011 ntBASIC14.2□□□□□ -0.14
EFNA3P52797 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.19□□□□□ -0.14
EFNA3P52797 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNA3P52797 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.19□□□□□ -0.14
EFNA3P52797 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 CLUHP2-201ENST00000426660 1303 ntBASIC14.19□□□□□ -0.14
EFNA3P52797 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
EFNA3P52797 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
EFNA3P52797 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNA3P52797 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
EFNA3P52797 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNA3P52797 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.19□□□□□ -0.14
EFNA3P52797 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNA3P52797 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.19□□□□□ -0.14
EFNA3P52797 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNA3P52797 C2orf69P2-201ENST00000562032 1123 ntBASIC14.19□□□□□ -0.14
EFNA3P52797 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.19□□□□□ -0.14
EFNA3P52797 DUX4L45-201ENST00000566406 1057 ntBASIC14.19□□□□□ -0.14
EFNA3P52797 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.19□□□□□ -0.14
EFNA3P52797 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.19□□□□□ -0.14
EFNA3P52797 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.19□□□□□ -0.14
EFNA3P52797 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
EFNA3P52797 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNA3P52797 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNA3P52797 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
EFNA3P52797 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNA3P52797 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
EFNA3P52797 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
EFNA3P52797 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNA3P52797 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
EFNA3P52797 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNA3P52797 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA3P52797 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA3P52797 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
EFNA3P52797 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA3P52797 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA3P52797 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms