Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RNF144AP50876 AL157414.3-201ENST00000624276 1954 ntBASIC14.21□□□□□ -0.13
RNF144AP50876 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF144AP50876 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RNF144AP50876 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RNF144AP50876 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.21□□□□□ -0.14
RNF144AP50876 REXO1L4P-201ENST00000605109 1937 ntBASIC14.21□□□□□ -0.14
RNF144AP50876 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
RNF144AP50876 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RNF144AP50876 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RNF144AP50876 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.21□□□□□ -0.14
RNF144AP50876 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF144AP50876 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RNF144AP50876 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF144AP50876 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF144AP50876 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF144AP50876 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF144AP50876 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF144AP50876 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF144AP50876 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF144AP50876 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF144AP50876 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF144AP50876 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF144AP50876 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF144AP50876 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF144AP50876 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF144AP50876 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF144AP50876 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF144AP50876 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF144AP50876 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
RNF144AP50876 AC236430.1-201ENST00000402231 743 ntBASIC14.2□□□□□ -0.14
RNF144AP50876 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.2□□□□□ -0.14
RNF144AP50876 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF144AP50876 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF144AP50876 VDAC1P7-201ENST00000462417 847 ntBASIC14.2□□□□□ -0.14
RNF144AP50876 FAM86LP-201ENST00000478302 853 ntBASIC14.2□□□□□ -0.14
RNF144AP50876 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF144AP50876 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.2□□□□□ -0.14
RNF144AP50876 RNA5SP421-201ENST00000516864 134 ntBASIC14.2□□□□□ -0.14
RNF144AP50876 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.2□□□□□ -0.14
RNF144AP50876 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF144AP50876 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF144AP50876 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF144AP50876 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
RNF144AP50876 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF144AP50876 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC14.2□□□□□ -0.14
RNF144AP50876 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC14.2□□□□□ -0.14
RNF144AP50876 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
RNF144AP50876 MROH4P-201ENST00000431302 1578 ntBASIC14.2□□□□□ -0.14
RNF144AP50876 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF144AP50876 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RNF144AP50876 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF144AP50876 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
RNF144AP50876 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF144AP50876 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
RNF144AP50876 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF144AP50876 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RNF144AP50876 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF144AP50876 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF144AP50876 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF144AP50876 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
RNF144AP50876 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF144AP50876 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.19□□□□□ -0.14
RNF144AP50876 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
RNF144AP50876 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.19□□□□□ -0.14
RNF144AP50876 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RNF144AP50876 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RNF144AP50876 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RNF144AP50876 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RNF144AP50876 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RNF144AP50876 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RNF144AP50876 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
RNF144AP50876 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.19□□□□□ -0.14
RNF144AP50876 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC14.19□□□□□ -0.14
RNF144AP50876 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.19□□□□□ -0.14
RNF144AP50876 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.19□□□□□ -0.14
RNF144AP50876 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC14.19□□□□□ -0.14
RNF144AP50876 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.19□□□□□ -0.14
RNF144AP50876 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.19□□□□□ -0.14
RNF144AP50876 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.19□□□□□ -0.14
RNF144AP50876 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.19□□□□□ -0.14
RNF144AP50876 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RNF144AP50876 AL391069.4-201ENST00000609583 481 ntBASIC14.19□□□□□ -0.14
RNF144AP50876 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 AC007191.1-201ENST00000623179 2995 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms