Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.41□□□□□ -0.26
CX3CR1P49238 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CX3CR1P49238 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CR1P49238 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.41□□□□□ -0.26
CX3CR1P49238 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CR1P49238 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CR1P49238 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CX3CR1P49238 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CR1P49238 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CR1P49238 ST20-AS1-201ENST00000560255 4223 ntBASIC13.41□□□□□ -0.26
CX3CR1P49238 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CX3CR1P49238 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CR1P49238 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CR1P49238 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CR1P49238 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.41□□□□□ -0.26
CX3CR1P49238 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CR1P49238 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CR1P49238 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.41□□□□□ -0.26
CX3CR1P49238 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CR1P49238 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.41□□□□□ -0.26
CX3CR1P49238 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.41□□□□□ -0.26
CX3CR1P49238 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.41□□□□□ -0.26
CX3CR1P49238 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CX3CR1P49238 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.41□□□□□ -0.26
CX3CR1P49238 AC135586.1-201ENST00000539323 574 ntBASIC13.41□□□□□ -0.26
CX3CR1P49238 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
CX3CR1P49238 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.41□□□□□ -0.26
CX3CR1P49238 SAMD11P1-201ENST00000571429 661 ntBASIC13.41□□□□□ -0.26
CX3CR1P49238 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CR1P49238 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CR1P49238 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.41□□□□□ -0.26
CX3CR1P49238 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CR1P49238 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CX3CR1P49238 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CX3CR1P49238 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CR1P49238 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CR1P49238 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CX3CR1P49238 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CR1P49238 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CX3CR1P49238 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.41□□□□□ -0.26
CX3CR1P49238 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CR1P49238 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CR1P49238 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CR1P49238 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CR1P49238 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CR1P49238 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.41□□□□□ -0.26
CX3CR1P49238 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CX3CR1P49238 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CR1P49238 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CR1P49238 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CX3CR1P49238 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.41□□□□□ -0.26
CX3CR1P49238 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CX3CR1P49238 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.4□□□□□ -0.26
CX3CR1P49238 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CX3CR1P49238 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CX3CR1P49238 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CX3CR1P49238 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.4□□□□□ -0.26
CX3CR1P49238 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CX3CR1P49238 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CX3CR1P49238 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CX3CR1P49238 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.4□□□□□ -0.26
CX3CR1P49238 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.4□□□□□ -0.26
CX3CR1P49238 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CX3CR1P49238 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CX3CR1P49238 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.4□□□□□ -0.26
CX3CR1P49238 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CX3CR1P49238 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CX3CR1P49238 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.4□□□□□ -0.26
CX3CR1P49238 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.4□□□□□ -0.26
CX3CR1P49238 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CX3CR1P49238 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CX3CR1P49238 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CX3CR1P49238 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
CX3CR1P49238 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CX3CR1P49238 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CX3CR1P49238 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.4□□□□□ -0.26
CX3CR1P49238 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CX3CR1P49238 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CX3CR1P49238 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CX3CR1P49238 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.4□□□□□ -0.26
CX3CR1P49238 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.4□□□□□ -0.26
CX3CR1P49238 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
CX3CR1P49238 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.4□□□□□ -0.26
CX3CR1P49238 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CX3CR1P49238 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.4□□□□□ -0.26
CX3CR1P49238 AC009407.1-201ENST00000568958 598 ntBASIC13.4□□□□□ -0.26
CX3CR1P49238 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.4□□□□□ -0.26
CX3CR1P49238 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.4□□□□□ -0.26
CX3CR1P49238 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CX3CR1P49238 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CX3CR1P49238 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.4□□□□□ -0.26
CX3CR1P49238 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.4□□□□□ -0.26
CX3CR1P49238 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CX3CR1P49238 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CX3CR1P49238 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.4□□□□□ -0.26
CX3CR1P49238 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CX3CR1P49238 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CX3CR1P49238 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CX3CR1P49238 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CX3CR1P49238 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms