Protein–RNA interactions for Protein: P42338

PIK3CB, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3CBP42338 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PIK3CBP42338 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
PIK3CBP42338 C1QBPP1-201ENST00000400117 770 ntBASIC14.63□□□□□ -0.07
PIK3CBP42338 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.63□□□□□ -0.07
PIK3CBP42338 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.63□□□□□ -0.07
PIK3CBP42338 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.63□□□□□ -0.07
PIK3CBP42338 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.63□□□□□ -0.07
PIK3CBP42338 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.63□□□□□ -0.07
PIK3CBP42338 BX539320.1-201ENST00000623759 877 ntBASIC14.63□□□□□ -0.07
PIK3CBP42338 AC008761.3-201ENST00000624803 892 ntBASIC14.63□□□□□ -0.07
PIK3CBP42338 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PIK3CBP42338 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PIK3CBP42338 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PIK3CBP42338 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PIK3CBP42338 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.63□□□□□ -0.07
PIK3CBP42338 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.63□□□□□ -0.07
PIK3CBP42338 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PIK3CBP42338 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.63□□□□□ -0.07
PIK3CBP42338 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PIK3CBP42338 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.63□□□□□ -0.07
PIK3CBP42338 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PIK3CBP42338 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
PIK3CBP42338 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3CBP42338 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3CBP42338 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3CBP42338 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PIK3CBP42338 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.62□□□□□ -0.07
PIK3CBP42338 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3CBP42338 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3CBP42338 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3CBP42338 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.62□□□□□ -0.07
PIK3CBP42338 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3CBP42338 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
PIK3CBP42338 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3CBP42338 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3CBP42338 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3CBP42338 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3CBP42338 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.62□□□□□ -0.07
PIK3CBP42338 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.62□□□□□ -0.07
PIK3CBP42338 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.62□□□□□ -0.07
PIK3CBP42338 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
PIK3CBP42338 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3CBP42338 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3CBP42338 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.62□□□□□ -0.07
PIK3CBP42338 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3CBP42338 SOCS2P1-201ENST00000417727 557 ntBASIC14.62□□□□□ -0.07
PIK3CBP42338 HLA-K-203ENST00000430151 1046 ntBASIC14.62□□□□□ -0.07
PIK3CBP42338 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
PIK3CBP42338 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.62□□□□□ -0.07
PIK3CBP42338 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.62□□□□□ -0.07
PIK3CBP42338 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.62□□□□□ -0.07
PIK3CBP42338 AC124283.3-201ENST00000570869 594 ntBASIC14.62□□□□□ -0.07
PIK3CBP42338 RN7SL204P-201ENST00000582831 262 ntBASIC14.62□□□□□ -0.07
PIK3CBP42338 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PIK3CBP42338 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.62□□□□□ -0.07
PIK3CBP42338 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.62□□□□□ -0.07
PIK3CBP42338 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3CBP42338 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3CBP42338 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3CBP42338 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
PIK3CBP42338 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3CBP42338 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.62□□□□□ -0.07
PIK3CBP42338 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3CBP42338 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3CBP42338 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PIK3CBP42338 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.61□□□□□ -0.07
PIK3CBP42338 AC139749.1-202ENST00000617529 3139 ntBASIC14.61□□□□□ -0.07
PIK3CBP42338 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3CBP42338 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
PIK3CBP42338 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3CBP42338 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3CBP42338 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3CBP42338 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3CBP42338 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3CBP42338 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3CBP42338 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3CBP42338 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3CBP42338 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.61□□□□□ -0.07
PIK3CBP42338 KRT8P22-201ENST00000562317 1415 ntBASIC14.61□□□□□ -0.07
PIK3CBP42338 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3CBP42338 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
PIK3CBP42338 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3CBP42338 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3CBP42338 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.61□□□□□ -0.07
PIK3CBP42338 MYCLP2-201ENST00000449268 967 ntBASIC14.61□□□□□ -0.07
PIK3CBP42338 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PIK3CBP42338 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.61□□□□□ -0.07
PIK3CBP42338 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.61□□□□□ -0.07
PIK3CBP42338 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.61□□□□□ -0.07
PIK3CBP42338 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.61□□□□□ -0.07
PIK3CBP42338 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.61□□□□□ -0.07
PIK3CBP42338 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.61□□□□□ -0.07
PIK3CBP42338 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
PIK3CBP42338 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3CBP42338 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3CBP42338 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3CBP42338 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.61□□□□□ -0.07
PIK3CBP42338 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3CBP42338 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PIK3CBP42338 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms