Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.45□□□□□ -0.42
CEACAM3P40198 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CEACAM3P40198 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
CEACAM3P40198 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.45□□□□□ -0.42
CEACAM3P40198 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CEACAM3P40198 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.45□□□□□ -0.42
CEACAM3P40198 MBP-202ENST00000355994 2772 ntTSL 5 BASIC12.45□□□□□ -0.42
CEACAM3P40198 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CEACAM3P40198 AC126177.1-201ENST00000547829 2218 ntBASIC12.45□□□□□ -0.42
CEACAM3P40198 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CEACAM3P40198 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.45□□□□□ -0.42
CEACAM3P40198 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CEACAM3P40198 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
CEACAM3P40198 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CEACAM3P40198 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.45□□□□□ -0.42
CEACAM3P40198 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CEACAM3P40198 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CEACAM3P40198 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CEACAM3P40198 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC12.44□□□□□ -0.42
CEACAM3P40198 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CEACAM3P40198 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.44□□□□□ -0.42
CEACAM3P40198 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CEACAM3P40198 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CEACAM3P40198 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.44□□□□□ -0.42
CEACAM3P40198 MROH4P-201ENST00000431302 1578 ntBASIC12.44□□□□□ -0.42
CEACAM3P40198 AC007787.1-201ENST00000588095 1583 ntBASIC12.44□□□□□ -0.42
CEACAM3P40198 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
CEACAM3P40198 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CEACAM3P40198 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CEACAM3P40198 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CEACAM3P40198 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CEACAM3P40198 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CEACAM3P40198 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CEACAM3P40198 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.44□□□□□ -0.42
CEACAM3P40198 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CEACAM3P40198 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CEACAM3P40198 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CEACAM3P40198 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.44□□□□□ -0.42
CEACAM3P40198 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CEACAM3P40198 ACKR1-201ENST00000368121 1240 ntBASIC12.44□□□□□ -0.42
CEACAM3P40198 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.44□□□□□ -0.42
CEACAM3P40198 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CEACAM3P40198 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CEACAM3P40198 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.44□□□□□ -0.42
CEACAM3P40198 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
CEACAM3P40198 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CEACAM3P40198 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CEACAM3P40198 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CEACAM3P40198 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CEACAM3P40198 AC114812.1-204ENST00000449669 728 ntBASIC12.44□□□□□ -0.42
CEACAM3P40198 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.44□□□□□ -0.42
CEACAM3P40198 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.44□□□□□ -0.42
CEACAM3P40198 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CEACAM3P40198 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.44□□□□□ -0.42
CEACAM3P40198 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.44□□□□□ -0.42
CEACAM3P40198 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC12.44□□□□□ -0.42
CEACAM3P40198 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.44□□□□□ -0.42
CEACAM3P40198 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.44□□□□□ -0.42
CEACAM3P40198 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.44□□□□□ -0.42
CEACAM3P40198 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CEACAM3P40198 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CEACAM3P40198 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.44□□□□□ -0.42
CEACAM3P40198 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CEACAM3P40198 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CEACAM3P40198 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CEACAM3P40198 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CEACAM3P40198 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CEACAM3P40198 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CEACAM3P40198 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CEACAM3P40198 CU639417.3-201ENST00000624240 1404 ntBASIC12.44□□□□□ -0.42
CEACAM3P40198 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CEACAM3P40198 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CEACAM3P40198 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
CEACAM3P40198 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.43□□□□□ -0.42
CEACAM3P40198 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
CEACAM3P40198 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
CEACAM3P40198 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CEACAM3P40198 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.43□□□□□ -0.42
CEACAM3P40198 AC093525.8-201ENST00000624099 1342 ntBASIC12.43□□□□□ -0.42
CEACAM3P40198 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CEACAM3P40198 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.43□□□□□ -0.42
CEACAM3P40198 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CEACAM3P40198 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
CEACAM3P40198 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CEACAM3P40198 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms