Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT9P35527 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.68■□□□□ 0.26
KRT9P35527 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT9P35527 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.68■□□□□ 0.26
KRT9P35527 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT9P35527 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT9P35527 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.68■□□□□ 0.26
KRT9P35527 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT9P35527 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.68■□□□□ 0.26
KRT9P35527 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT9P35527 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT9P35527 AC044860.1-202ENST00000559481 777 ntBASIC16.68■□□□□ 0.26
KRT9P35527 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
KRT9P35527 AC093512.1-201ENST00000617969 520 ntBASIC16.68■□□□□ 0.26
KRT9P35527 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
KRT9P35527 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT9P35527 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.68■□□□□ 0.26
KRT9P35527 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT9P35527 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT9P35527 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT9P35527 HSPA7-201ENST00000445535 1927 ntBASIC16.68■□□□□ 0.26
KRT9P35527 AC006504.5-208ENST00000588784 2401 ntBASIC16.68■□□□□ 0.26
KRT9P35527 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
KRT9P35527 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT9P35527 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT9P35527 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT9P35527 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.68■□□□□ 0.26
KRT9P35527 AC007787.1-201ENST00000588095 1583 ntBASIC16.68■□□□□ 0.26
KRT9P35527 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT9P35527 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT9P35527 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
KRT9P35527 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT9P35527 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
KRT9P35527 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT9P35527 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
KRT9P35527 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT9P35527 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT9P35527 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.67■□□□□ 0.26
KRT9P35527 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT9P35527 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.67■□□□□ 0.26
KRT9P35527 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT9P35527 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.67■□□□□ 0.26
KRT9P35527 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
KRT9P35527 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT9P35527 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT9P35527 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
KRT9P35527 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.67■□□□□ 0.26
KRT9P35527 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT9P35527 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT9P35527 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.67■□□□□ 0.26
KRT9P35527 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT9P35527 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT9P35527 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.67■□□□□ 0.26
KRT9P35527 AC015922.1-201ENST00000421102 1152 ntBASIC16.67■□□□□ 0.26
KRT9P35527 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.67■□□□□ 0.26
KRT9P35527 AC055876.3-201ENST00000431496 288 ntBASIC16.67■□□□□ 0.26
KRT9P35527 RPL13P2-201ENST00000440687 659 ntBASIC16.67■□□□□ 0.26
KRT9P35527 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT9P35527 AC092183.1-201ENST00000469884 875 ntBASIC16.67■□□□□ 0.26
KRT9P35527 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.67■□□□□ 0.26
KRT9P35527 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.67■□□□□ 0.26
KRT9P35527 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.67■□□□□ 0.26
KRT9P35527 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.67■□□□□ 0.26
KRT9P35527 LINC01115-203ENST00000606068 577 ntBASIC16.67■□□□□ 0.26
KRT9P35527 AL844908.2-201ENST00000609461 460 ntBASIC16.67■□□□□ 0.26
KRT9P35527 AC138649.4-201ENST00000612222 287 ntBASIC16.67■□□□□ 0.26
KRT9P35527 AL390754.1-201ENST00000619088 582 ntBASIC16.67■□□□□ 0.26
KRT9P35527 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT9P35527 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.67■□□□□ 0.26
KRT9P35527 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT9P35527 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT9P35527 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT9P35527 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT9P35527 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT9P35527 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT9P35527 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT9P35527 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
KRT9P35527 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT9P35527 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
KRT9P35527 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
KRT9P35527 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT9P35527 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT9P35527 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT9P35527 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT9P35527 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT9P35527 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT9P35527 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT9P35527 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT9P35527 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT9P35527 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
KRT9P35527 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
KRT9P35527 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.66■□□□□ 0.26
KRT9P35527 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.66■□□□□ 0.26
KRT9P35527 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.66■□□□□ 0.26
KRT9P35527 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
KRT9P35527 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.66■□□□□ 0.26
KRT9P35527 ZNF890P-202ENST00000530367 1156 ntBASIC16.66■□□□□ 0.26
KRT9P35527 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT9P35527 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.66■□□□□ 0.26
KRT9P35527 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms