Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.44□□□□□ -0.1
PTPN6P29350 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.44□□□□□ -0.1
PTPN6P29350 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.44□□□□□ -0.1
PTPN6P29350 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PTPN6P29350 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PTPN6P29350 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN6P29350 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN6P29350 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN6P29350 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.43□□□□□ -0.1
PTPN6P29350 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PTPN6P29350 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN6P29350 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN6P29350 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.43□□□□□ -0.1
PTPN6P29350 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN6P29350 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN6P29350 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.43□□□□□ -0.1
PTPN6P29350 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.43□□□□□ -0.1
PTPN6P29350 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN6P29350 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.43□□□□□ -0.1
PTPN6P29350 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PTPN6P29350 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN6P29350 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PTPN6P29350 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
PTPN6P29350 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN6P29350 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN6P29350 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN6P29350 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN6P29350 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.43□□□□□ -0.1
PTPN6P29350 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN6P29350 PIN1P1-201ENST00000412108 996 ntBASIC14.43□□□□□ -0.1
PTPN6P29350 GNAQP1-201ENST00000444815 1067 ntBASIC14.43□□□□□ -0.1
PTPN6P29350 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.43□□□□□ -0.1
PTPN6P29350 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN6P29350 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.43□□□□□ -0.1
PTPN6P29350 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.43□□□□□ -0.1
PTPN6P29350 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.43□□□□□ -0.1
PTPN6P29350 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.43□□□□□ -0.1
PTPN6P29350 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
PTPN6P29350 AL391069.4-201ENST00000609583 481 ntBASIC14.43□□□□□ -0.1
PTPN6P29350 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN6P29350 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PTPN6P29350 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.43□□□□□ -0.1
PTPN6P29350 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PTPN6P29350 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.43□□□□□ -0.1
PTPN6P29350 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN6P29350 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN6P29350 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN6P29350 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN6P29350 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PTPN6P29350 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN6P29350 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.43□□□□□ -0.1
PTPN6P29350 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN6P29350 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PTPN6P29350 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
PTPN6P29350 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PTPN6P29350 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PTPN6P29350 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN6P29350 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
PTPN6P29350 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN6P29350 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.42□□□□□ -0.1
PTPN6P29350 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN6P29350 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
PTPN6P29350 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PTPN6P29350 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN6P29350 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN6P29350 AL157414.3-201ENST00000624276 1954 ntBASIC14.42□□□□□ -0.1
PTPN6P29350 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN6P29350 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN6P29350 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN6P29350 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN6P29350 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN6P29350 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN6P29350 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PTPN6P29350 SPDYE19P-201ENST00000338590 713 ntBASIC14.42□□□□□ -0.1
PTPN6P29350 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN6P29350 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.42□□□□□ -0.1
PTPN6P29350 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN6P29350 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PTPN6P29350 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN6P29350 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.42□□□□□ -0.1
PTPN6P29350 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.42□□□□□ -0.1
PTPN6P29350 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN6P29350 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.42□□□□□ -0.1
PTPN6P29350 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.42□□□□□ -0.1
PTPN6P29350 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN6P29350 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN6P29350 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN6P29350 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PTPN6P29350 MIR600HG-201ENST00000449175 5984 ntBASIC14.42□□□□□ -0.1
PTPN6P29350 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms