Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AC023090.2-201ENST00000625182 2110 ntBASIC15.49■□□□□ 0.07
PTPN3P26045 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN3P26045 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN3P26045 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN3P26045 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
PTPN3P26045 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN3P26045 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN3P26045 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN3P26045 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.49■□□□□ 0.07
PTPN3P26045 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
PTPN3P26045 TERF1P3-201ENST00000505638 1227 ntBASIC15.49■□□□□ 0.07
PTPN3P26045 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
PTPN3P26045 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PTPN3P26045 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.49■□□□□ 0.07
PTPN3P26045 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.49■□□□□ 0.07
PTPN3P26045 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.49■□□□□ 0.07
PTPN3P26045 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.49■□□□□ 0.07
PTPN3P26045 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.49■□□□□ 0.07
PTPN3P26045 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PTPN3P26045 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PTPN3P26045 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN3P26045 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.49■□□□□ 0.07
PTPN3P26045 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.49■□□□□ 0.07
PTPN3P26045 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.49■□□□□ 0.07
PTPN3P26045 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN3P26045 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.49■□□□□ 0.07
PTPN3P26045 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN3P26045 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PTPN3P26045 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN3P26045 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.48■□□□□ 0.07
PTPN3P26045 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN3P26045 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN3P26045 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PTPN3P26045 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.48■□□□□ 0.07
PTPN3P26045 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
PTPN3P26045 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.48■□□□□ 0.07
PTPN3P26045 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
PTPN3P26045 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PTPN3P26045 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
PTPN3P26045 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN3P26045 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN3P26045 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN3P26045 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.48■□□□□ 0.07
PTPN3P26045 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.48■□□□□ 0.07
PTPN3P26045 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN3P26045 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN3P26045 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN3P26045 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN3P26045 KLF2P2-201ENST00000416807 1039 ntBASIC15.48■□□□□ 0.07
PTPN3P26045 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN3P26045 HMGN1P19-201ENST00000436976 333 ntBASIC15.48■□□□□ 0.07
PTPN3P26045 AC114812.1-204ENST00000449669 728 ntBASIC15.48■□□□□ 0.07
PTPN3P26045 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.48■□□□□ 0.07
PTPN3P26045 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN3P26045 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.48■□□□□ 0.07
PTPN3P26045 DUX4L47-201ENST00000566374 394 ntBASIC15.48■□□□□ 0.07
PTPN3P26045 TP53TG3HP-202ENST00000569755 579 ntBASIC15.48■□□□□ 0.07
PTPN3P26045 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.48■□□□□ 0.07
PTPN3P26045 CLUHP6-201ENST00000580789 941 ntBASIC15.48■□□□□ 0.07
PTPN3P26045 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PTPN3P26045 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.48■□□□□ 0.07
PTPN3P26045 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.48■□□□□ 0.07
PTPN3P26045 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN3P26045 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
PTPN3P26045 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN3P26045 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN3P26045 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN3P26045 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN3P26045 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN3P26045 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
PTPN3P26045 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN3P26045 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PTPN3P26045 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.48■□□□□ 0.07
PTPN3P26045 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.48■□□□□ 0.07
PTPN3P26045 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN3P26045 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN3P26045 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
PTPN3P26045 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN3P26045 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PTPN3P26045 AC140479.7-201ENST00000636301 2332 ntBASIC15.48■□□□□ 0.07
PTPN3P26045 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.47■□□□□ 0.07
PTPN3P26045 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN3P26045 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN3P26045 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN3P26045 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.47■□□□□ 0.07
PTPN3P26045 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.47■□□□□ 0.07
PTPN3P26045 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.47■□□□□ 0.07
PTPN3P26045 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.47■□□□□ 0.07
PTPN3P26045 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PTPN3P26045 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN3P26045 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN3P26045 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN3P26045 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.47■□□□□ 0.07
PTPN3P26045 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN3P26045 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.47■□□□□ 0.07
PTPN3P26045 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.47■□□□□ 0.07
PTPN3P26045 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.47■□□□□ 0.07
PTPN3P26045 ENPP7P5-201ENST00000541031 1031 ntBASIC15.47■□□□□ 0.07
PTPN3P26045 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN3P26045 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms