Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
NR4A1P22736 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A1P22736 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A1P22736 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.24□□□□□ -0.13
NR4A1P22736 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.24□□□□□ -0.13
NR4A1P22736 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NR4A1P22736 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.24□□□□□ -0.13
NR4A1P22736 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.24□□□□□ -0.13
NR4A1P22736 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NR4A1P22736 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.24□□□□□ -0.13
NR4A1P22736 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.24□□□□□ -0.13
NR4A1P22736 AC093520.2-201ENST00000561830 333 ntBASIC14.24□□□□□ -0.13
NR4A1P22736 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.24□□□□□ -0.13
NR4A1P22736 AL138918.1-201ENST00000568306 659 ntBASIC14.24□□□□□ -0.13
NR4A1P22736 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.24□□□□□ -0.13
NR4A1P22736 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.24□□□□□ -0.13
NR4A1P22736 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.24□□□□□ -0.13
NR4A1P22736 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.24□□□□□ -0.13
NR4A1P22736 AC084121.4-201ENST00000641598 221 ntBASIC14.24□□□□□ -0.13
NR4A1P22736 AF228730.8-201ENST00000642140 221 ntBASIC14.24□□□□□ -0.13
NR4A1P22736 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A1P22736 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
NR4A1P22736 UXT-AS1-201ENST00000590504 1525 ntBASIC14.24□□□□□ -0.13
NR4A1P22736 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.24□□□□□ -0.13
NR4A1P22736 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
NR4A1P22736 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
NR4A1P22736 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
NR4A1P22736 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A1P22736 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A1P22736 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A1P22736 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A1P22736 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NR4A1P22736 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NR4A1P22736 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
NR4A1P22736 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A1P22736 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
NR4A1P22736 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NR4A1P22736 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.23□□□□□ -0.13
NR4A1P22736 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A1P22736 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.23□□□□□ -0.13
NR4A1P22736 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.23□□□□□ -0.13
NR4A1P22736 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
NR4A1P22736 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A1P22736 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A1P22736 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.23□□□□□ -0.13
NR4A1P22736 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
NR4A1P22736 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A1P22736 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NR4A1P22736 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A1P22736 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A1P22736 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A1P22736 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.23□□□□□ -0.13
NR4A1P22736 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A1P22736 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.23□□□□□ -0.13
NR4A1P22736 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.23□□□□□ -0.13
NR4A1P22736 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.23□□□□□ -0.13
NR4A1P22736 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
NR4A1P22736 KRT18P32-201ENST00000424695 1287 ntBASIC14.23□□□□□ -0.13
NR4A1P22736 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.23□□□□□ -0.13
NR4A1P22736 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.23□□□□□ -0.13
NR4A1P22736 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A1P22736 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.23□□□□□ -0.13
NR4A1P22736 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.23□□□□□ -0.13
NR4A1P22736 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.23□□□□□ -0.13
NR4A1P22736 PRYP6-201ENST00000514804 343 ntBASIC14.23□□□□□ -0.13
NR4A1P22736 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.23□□□□□ -0.13
NR4A1P22736 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.23□□□□□ -0.13
NR4A1P22736 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A1P22736 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.23□□□□□ -0.13
NR4A1P22736 AC009093.7-201ENST00000623853 1223 ntBASIC14.23□□□□□ -0.13
NR4A1P22736 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.23□□□□□ -0.13
NR4A1P22736 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.23□□□□□ -0.13
NR4A1P22736 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
NR4A1P22736 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A1P22736 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NR4A1P22736 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A1P22736 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A1P22736 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.23□□□□□ -0.13
NR4A1P22736 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A1P22736 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NR4A1P22736 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.23□□□□□ -0.13
NR4A1P22736 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A1P22736 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.23□□□□□ -0.13
NR4A1P22736 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NR4A1P22736 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC14.23□□□□□ -0.13
NR4A1P22736 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.23□□□□□ -0.13
NR4A1P22736 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NR4A1P22736 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A1P22736 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NR4A1P22736 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A1P22736 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR4A1P22736 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
NR4A1P22736 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR4A1P22736 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR4A1P22736 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.22□□□□□ -0.13
NR4A1P22736 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.22□□□□□ -0.13
NR4A1P22736 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.22□□□□□ -0.13
NR4A1P22736 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
NR4A1P22736 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR4A1P22736 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms