Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TNFRSF1BP20333 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 CNN2P11-201ENST00000429351 262 ntBASIC14.16□□□□□ -0.14
TNFRSF1BP20333 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 AL645728.2-202ENST00000641679 227 ntBASIC14.16□□□□□ -0.14
TNFRSF1BP20333 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFRSF1BP20333 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.15□□□□□ -0.14
TNFRSF1BP20333 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.15□□□□□ -0.14
TNFRSF1BP20333 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 HLA-V-204ENST00000476601 1289 ntBASIC14.15□□□□□ -0.14
TNFRSF1BP20333 AL512356.2-201ENST00000546955 174 ntBASIC14.15□□□□□ -0.14
TNFRSF1BP20333 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 AC044860.1-202ENST00000559481 777 ntBASIC14.15□□□□□ -0.14
TNFRSF1BP20333 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 AL596442.2-201ENST00000610240 980 ntBASIC14.15□□□□□ -0.14
TNFRSF1BP20333 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFRSF1BP20333 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms