Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTPS1P17812 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CTPS1P17812 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CTPS1P17812 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTPS1P17812 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTPS1P17812 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.29■□□□□ 0.04
CTPS1P17812 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTPS1P17812 MIR600HG-201ENST00000449175 5984 ntBASIC15.29■□□□□ 0.04
CTPS1P17812 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTPS1P17812 AC006058.4-201ENST00000624016 1670 ntBASIC15.28■□□□□ 0.04
CTPS1P17812 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTPS1P17812 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTPS1P17812 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTPS1P17812 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTPS1P17812 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.28■□□□□ 0.04
CTPS1P17812 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTPS1P17812 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTPS1P17812 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CTPS1P17812 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTPS1P17812 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.28■□□□□ 0.04
CTPS1P17812 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTPS1P17812 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTPS1P17812 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTPS1P17812 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.28■□□□□ 0.04
CTPS1P17812 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTPS1P17812 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTPS1P17812 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
CTPS1P17812 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CTPS1P17812 LILRP1-201ENST00000444199 1370 ntBASIC15.28■□□□□ 0.04
CTPS1P17812 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.28■□□□□ 0.04
CTPS1P17812 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTPS1P17812 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTPS1P17812 ZBED1P1-201ENST00000502364 1930 ntBASIC15.28■□□□□ 0.04
CTPS1P17812 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTPS1P17812 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.28■□□□□ 0.04
CTPS1P17812 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CTPS1P17812 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTPS1P17812 AC005229.1-201ENST00000392885 409 ntBASIC15.28■□□□□ 0.04
CTPS1P17812 ACTBP8-201ENST00000403258 1108 ntBASIC15.28■□□□□ 0.04
CTPS1P17812 EIF3FP3-201ENST00000434851 1086 ntBASIC15.28■□□□□ 0.04
CTPS1P17812 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTPS1P17812 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTPS1P17812 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.28■□□□□ 0.04
CTPS1P17812 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.28■□□□□ 0.04
CTPS1P17812 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTPS1P17812 FTH1P14-201ENST00000482930 551 ntBASIC15.28■□□□□ 0.04
CTPS1P17812 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.28■□□□□ 0.04
CTPS1P17812 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.28■□□□□ 0.04
CTPS1P17812 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.28■□□□□ 0.04
CTPS1P17812 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.28■□□□□ 0.04
CTPS1P17812 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.28■□□□□ 0.04
CTPS1P17812 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.28■□□□□ 0.04
CTPS1P17812 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.28■□□□□ 0.04
CTPS1P17812 AL022328.1-201ENST00000610050 478 ntBASIC15.28■□□□□ 0.04
CTPS1P17812 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTPS1P17812 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CTPS1P17812 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTPS1P17812 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTPS1P17812 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTPS1P17812 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.28■□□□□ 0.04
CTPS1P17812 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.28■□□□□ 0.04
CTPS1P17812 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTPS1P17812 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CTPS1P17812 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTPS1P17812 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.27■□□□□ 0.04
CTPS1P17812 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTPS1P17812 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.27■□□□□ 0.04
CTPS1P17812 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTPS1P17812 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.27■□□□□ 0.04
CTPS1P17812 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTPS1P17812 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTPS1P17812 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CTPS1P17812 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTPS1P17812 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTPS1P17812 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CTPS1P17812 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTPS1P17812 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.27■□□□□ 0.04
CTPS1P17812 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CTPS1P17812 AC055811.4-201ENST00000624039 1754 ntBASIC15.27■□□□□ 0.04
CTPS1P17812 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CTPS1P17812 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTPS1P17812 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTPS1P17812 AC092933.1-201ENST00000393644 945 ntBASIC15.27■□□□□ 0.04
CTPS1P17812 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CTPS1P17812 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.27■□□□□ 0.04
CTPS1P17812 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.27■□□□□ 0.04
CTPS1P17812 AC022616.1-201ENST00000518688 554 ntBASIC15.27■□□□□ 0.04
CTPS1P17812 HILS1-202ENST00000545329 423 ntBASIC15.27■□□□□ 0.04
CTPS1P17812 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTPS1P17812 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.27■□□□□ 0.04
CTPS1P17812 AC244669.2-201ENST00000612320 853 ntBASIC15.27■□□□□ 0.04
CTPS1P17812 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.27■□□□□ 0.04
CTPS1P17812 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTPS1P17812 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.27■□□□□ 0.03
CTPS1P17812 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTPS1P17812 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTPS1P17812 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTPS1P17812 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTPS1P17812 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.27■□□□□ 0.03
CTPS1P17812 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms