Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL11A1P12107 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.85■□□□□ 0.29
COL11A1P12107 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
COL11A1P12107 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
COL11A1P12107 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.85■□□□□ 0.29
COL11A1P12107 KRT18P9-201ENST00000604826 1300 ntBASIC16.85■□□□□ 0.29
COL11A1P12107 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL11A1P12107 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.85■□□□□ 0.29
COL11A1P12107 AC011270.2-201ENST00000624293 2550 ntBASIC16.85■□□□□ 0.29
COL11A1P12107 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL11A1P12107 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.85■□□□□ 0.29
COL11A1P12107 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.84■□□□□ 0.29
COL11A1P12107 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.84■□□□□ 0.29
COL11A1P12107 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.84■□□□□ 0.29
COL11A1P12107 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.84■□□□□ 0.29
COL11A1P12107 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.84■□□□□ 0.29
COL11A1P12107 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
COL11A1P12107 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.84■□□□□ 0.29
COL11A1P12107 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 AC092135.3-201ENST00000624151 1846 ntBASIC16.84■□□□□ 0.29
COL11A1P12107 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
COL11A1P12107 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.84■□□□□ 0.29
COL11A1P12107 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.84■□□□□ 0.29
COL11A1P12107 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.84■□□□□ 0.29
COL11A1P12107 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.84■□□□□ 0.29
COL11A1P12107 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.84■□□□□ 0.29
COL11A1P12107 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.84■□□□□ 0.29
COL11A1P12107 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.84■□□□□ 0.29
COL11A1P12107 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.84■□□□□ 0.29
COL11A1P12107 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.84■□□□□ 0.29
COL11A1P12107 AC019193.1-201ENST00000506678 823 ntBASIC16.84■□□□□ 0.29
COL11A1P12107 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.84■□□□□ 0.29
COL11A1P12107 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.84■□□□□ 0.29
COL11A1P12107 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.84■□□□□ 0.29
COL11A1P12107 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL11A1P12107 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
COL11A1P12107 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.83■□□□□ 0.29
COL11A1P12107 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
COL11A1P12107 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
COL11A1P12107 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
COL11A1P12107 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
COL11A1P12107 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
COL11A1P12107 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
COL11A1P12107 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COL11A1P12107 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL11A1P12107 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.83■□□□□ 0.28
COL11A1P12107 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COL11A1P12107 AC026316.1-201ENST00000398900 414 ntBASIC16.83■□□□□ 0.28
COL11A1P12107 DUTP3-201ENST00000450025 415 ntBASIC16.83■□□□□ 0.28
COL11A1P12107 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.83■□□□□ 0.28
COL11A1P12107 NPM1P43-201ENST00000558669 786 ntBASIC16.83■□□□□ 0.28
COL11A1P12107 AC007881.3-201ENST00000608897 607 ntBASIC16.83■□□□□ 0.28
COL11A1P12107 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.83■□□□□ 0.28
COL11A1P12107 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.83■□□□□ 0.28
COL11A1P12107 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL11A1P12107 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.83■□□□□ 0.28
COL11A1P12107 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COL11A1P12107 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL11A1P12107 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
COL11A1P12107 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.83■□□□□ 0.28
COL11A1P12107 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COL11A1P12107 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.83■□□□□ 0.28
COL11A1P12107 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL11A1P12107 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COL11A1P12107 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL11A1P12107 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
COL11A1P12107 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
COL11A1P12107 AC132872.4-202ENST00000622924 2756 ntBASIC16.82■□□□□ 0.28
COL11A1P12107 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL11A1P12107 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL11A1P12107 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL11A1P12107 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.82■□□□□ 0.28
COL11A1P12107 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.82■□□□□ 0.28
COL11A1P12107 CTBP2P4-201ENST00000513884 920 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms