Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
CAPN1P07384 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.05■□□□□ -0
CAPN1P07384 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CAPN1P07384 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CAPN1P07384 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CAPN1P07384 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.04■□□□□ -0
CAPN1P07384 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC15.04■□□□□ -0
CAPN1P07384 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.04■□□□□ -0
CAPN1P07384 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.04■□□□□ -0
CAPN1P07384 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.04■□□□□ -0
CAPN1P07384 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CAPN1P07384 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CAPN1P07384 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CAPN1P07384 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.04■□□□□ -0
CAPN1P07384 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CAPN1P07384 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CAPN1P07384 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CAPN1P07384 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CAPN1P07384 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CAPN1P07384 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.04■□□□□ -0
CAPN1P07384 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CAPN1P07384 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CAPN1P07384 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.04■□□□□ -0
CAPN1P07384 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.04■□□□□ -0
CAPN1P07384 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CAPN1P07384 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CAPN1P07384 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.04■□□□□ -0
CAPN1P07384 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.04■□□□□ -0
CAPN1P07384 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CAPN1P07384 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.04■□□□□ -0
CAPN1P07384 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.04■□□□□ -0
CAPN1P07384 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CAPN1P07384 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.04■□□□□ -0
CAPN1P07384 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CAPN1P07384 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CAPN1P07384 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.04■□□□□ -0
CAPN1P07384 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.04■□□□□ -0
CAPN1P07384 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CAPN1P07384 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.04■□□□□ -0
CAPN1P07384 AP006294.1-201ENST00000415407 339 ntBASIC15.04■□□□□ -0
CAPN1P07384 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
CAPN1P07384 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.04■□□□□ -0
CAPN1P07384 ELK1P1-201ENST00000485699 580 ntBASIC15.04■□□□□ -0
CAPN1P07384 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CAPN1P07384 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
CAPN1P07384 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.04■□□□□ -0
CAPN1P07384 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.04■□□□□ -0
CAPN1P07384 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.04■□□□□ -0
CAPN1P07384 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
CAPN1P07384 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CAPN1P07384 CTBP2P3-201ENST00000585629 1255 ntBASIC15.04■□□□□ -0
CAPN1P07384 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
CAPN1P07384 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.04■□□□□ -0
CAPN1P07384 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.04■□□□□ -0
CAPN1P07384 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CAPN1P07384 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CAPN1P07384 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CAPN1P07384 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CAPN1P07384 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.04■□□□□ -0
CAPN1P07384 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.04■□□□□ -0
CAPN1P07384 CICP4-201ENST00000447359 2812 ntBASIC15.04■□□□□ -0
CAPN1P07384 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.04■□□□□ -0
CAPN1P07384 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CAPN1P07384 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CAPN1P07384 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
CAPN1P07384 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.03■□□□□ -0
CAPN1P07384 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CAPN1P07384 AL009178.2-201ENST00000597278 2719 ntBASIC15.03■□□□□ -0
CAPN1P07384 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CAPN1P07384 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CAPN1P07384 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.03■□□□□ -0
CAPN1P07384 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.03■□□□□ -0
CAPN1P07384 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CAPN1P07384 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.03■□□□□ -0
CAPN1P07384 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CAPN1P07384 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.03■□□□□ -0
CAPN1P07384 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CAPN1P07384 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CAPN1P07384 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CAPN1P07384 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CAPN1P07384 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
CAPN1P07384 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.03■□□□□ -0
CAPN1P07384 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.03■□□□□ -0
CAPN1P07384 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.03■□□□□ -0
CAPN1P07384 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.03■□□□□ -0
CAPN1P07384 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CAPN1P07384 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.03■□□□□ -0
CAPN1P07384 MYCLP2-201ENST00000449268 967 ntBASIC15.03■□□□□ -0
CAPN1P07384 RN7SL752P-201ENST00000463779 287 ntBASIC15.03■□□□□ -0
CAPN1P07384 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.03■□□□□ -0
CAPN1P07384 AC123567.1-201ENST00000548294 1261 ntBASIC15.03■□□□□ -0
CAPN1P07384 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.03■□□□□ -0
CAPN1P07384 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.03■□□□□ -0
CAPN1P07384 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.03■□□□□ -0
CAPN1P07384 AC132938.2-201ENST00000579188 680 ntBASIC15.03■□□□□ -0
CAPN1P07384 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.03■□□□□ -0
CAPN1P07384 AL591163.1-201ENST00000641757 987 ntBASIC15.03■□□□□ -0
CAPN1P07384 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CAPN1P07384 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CAPN1P07384 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms