Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.1■□□□□ 0.33
TPM3P06753 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.1■□□□□ 0.33
TPM3P06753 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.1■□□□□ 0.33
TPM3P06753 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.1■□□□□ 0.33
TPM3P06753 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC17.1■□□□□ 0.33
TPM3P06753 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPM3P06753 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TPM3P06753 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TPM3P06753 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TPM3P06753 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPM3P06753 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPM3P06753 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TPM3P06753 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TPM3P06753 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPM3P06753 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPM3P06753 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC17.1■□□□□ 0.33
TPM3P06753 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TPM3P06753 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TPM3P06753 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC17.09■□□□□ 0.33
TPM3P06753 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC17.09■□□□□ 0.33
TPM3P06753 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TPM3P06753 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TPM3P06753 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TPM3P06753 AC023090.2-201ENST00000625182 2110 ntBASIC17.09■□□□□ 0.33
TPM3P06753 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM3P06753 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TPM3P06753 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TPM3P06753 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TPM3P06753 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM3P06753 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC17.09■□□□□ 0.33
TPM3P06753 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM3P06753 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM3P06753 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM3P06753 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC17.09■□□□□ 0.33
TPM3P06753 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC17.09■□□□□ 0.33
TPM3P06753 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM3P06753 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TPM3P06753 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM3P06753 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM3P06753 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM3P06753 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TPM3P06753 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TPM3P06753 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM3P06753 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TPM3P06753 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.09■□□□□ 0.33
TPM3P06753 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM3P06753 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.09■□□□□ 0.33
TPM3P06753 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.09■□□□□ 0.33
TPM3P06753 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TPM3P06753 AL353705.2-201ENST00000428243 662 ntBASIC17.09■□□□□ 0.33
TPM3P06753 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.09■□□□□ 0.33
TPM3P06753 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TPM3P06753 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.09■□□□□ 0.33
TPM3P06753 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
TPM3P06753 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.09■□□□□ 0.33
TPM3P06753 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
TPM3P06753 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.09■□□□□ 0.33
TPM3P06753 AC106730.1-201ENST00000566722 1090 ntBASIC17.09■□□□□ 0.33
TPM3P06753 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.09■□□□□ 0.33
TPM3P06753 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.09■□□□□ 0.33
TPM3P06753 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM3P06753 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC17.09■□□□□ 0.33
TPM3P06753 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TPM3P06753 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.09■□□□□ 0.33
TPM3P06753 AC012508.2-201ENST00000567613 1472 ntBASIC17.09■□□□□ 0.33
TPM3P06753 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM3P06753 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TPM3P06753 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM3P06753 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.09■□□□□ 0.33
TPM3P06753 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC17.09■□□□□ 0.33
TPM3P06753 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM3P06753 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM3P06753 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM3P06753 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM3P06753 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC17.09■□□□□ 0.33
TPM3P06753 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TPM3P06753 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
TPM3P06753 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
TPM3P06753 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TPM3P06753 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TPM3P06753 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TPM3P06753 DGCR9-201ENST00000609630 2415 ntBASIC17.08■□□□□ 0.33
TPM3P06753 AC027612.1-201ENST00000445234 2395 ntBASIC17.08■□□□□ 0.33
TPM3P06753 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TPM3P06753 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.08■□□□□ 0.33
TPM3P06753 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TPM3P06753 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TPM3P06753 SLC6A6P1-201ENST00000413933 1850 ntBASIC17.08■□□□□ 0.33
TPM3P06753 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPM3P06753 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPM3P06753 AP3S2-216ENST00000617003 1561 ntBASIC17.08■□□□□ 0.32
TPM3P06753 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPM3P06753 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC17.08■□□□□ 0.32
TPM3P06753 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPM3P06753 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.08■□□□□ 0.32
TPM3P06753 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPM3P06753 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPM3P06753 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TPM3P06753 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TPM3P06753 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms