Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RB1P06400 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RB1P06400 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RB1P06400 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RB1P06400 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RB1P06400 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RB1P06400 AL137783.1-201ENST00000623494 1896 ntBASIC15.91■□□□□ 0.14
RB1P06400 AC020910.5-201ENST00000623668 1865 ntBASIC15.91■□□□□ 0.14
RB1P06400 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RB1P06400 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RB1P06400 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
RB1P06400 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.9■□□□□ 0.14
RB1P06400 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RB1P06400 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RB1P06400 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.9■□□□□ 0.14
RB1P06400 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
RB1P06400 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RB1P06400 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.9■□□□□ 0.14
RB1P06400 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RB1P06400 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RB1P06400 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RB1P06400 PCDHB19P-201ENST00000570871 2371 ntBASIC15.9■□□□□ 0.14
RB1P06400 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RB1P06400 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RB1P06400 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RB1P06400 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RB1P06400 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RB1P06400 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RB1P06400 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RB1P06400 AC026320.2-201ENST00000434379 478 ntBASIC15.9■□□□□ 0.14
RB1P06400 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.9■□□□□ 0.14
RB1P06400 AP002803.1-201ENST00000528836 498 ntBASIC15.9■□□□□ 0.14
RB1P06400 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RB1P06400 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RB1P06400 AC005962.1-201ENST00000584100 773 ntBASIC15.9■□□□□ 0.14
RB1P06400 MIR6720-201ENST00000611664 98 ntBASIC15.9■□□□□ 0.14
RB1P06400 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
RB1P06400 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RB1P06400 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RB1P06400 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RB1P06400 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RB1P06400 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RB1P06400 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RB1P06400 MST1L-201ENST00000442552 2185 ntBASIC15.9■□□□□ 0.14
RB1P06400 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.9■□□□□ 0.14
RB1P06400 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.9■□□□□ 0.14
RB1P06400 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RB1P06400 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
RB1P06400 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
RB1P06400 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.14
RB1P06400 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RB1P06400 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RB1P06400 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RB1P06400 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RB1P06400 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.89■□□□□ 0.13
RB1P06400 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
RB1P06400 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RB1P06400 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RB1P06400 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RB1P06400 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RB1P06400 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RB1P06400 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.89■□□□□ 0.13
RB1P06400 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.89■□□□□ 0.13
RB1P06400 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RB1P06400 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RB1P06400 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RB1P06400 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RB1P06400 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RB1P06400 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RB1P06400 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.89■□□□□ 0.13
RB1P06400 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RB1P06400 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.89■□□□□ 0.13
RB1P06400 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.89■□□□□ 0.13
RB1P06400 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.89■□□□□ 0.13
RB1P06400 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.89■□□□□ 0.13
RB1P06400 MIR6769A-201ENST00000617340 73 ntBASIC15.89■□□□□ 0.13
RB1P06400 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RB1P06400 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.89■□□□□ 0.13
RB1P06400 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RB1P06400 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RB1P06400 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RB1P06400 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RB1P06400 AL662844.4-201ENST00000606367 2838 ntBASIC15.89■□□□□ 0.13
RB1P06400 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
RB1P06400 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.89■□□□□ 0.13
RB1P06400 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RB1P06400 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RB1P06400 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.88■□□□□ 0.13
RB1P06400 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RB1P06400 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.88■□□□□ 0.13
RB1P06400 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.88■□□□□ 0.13
RB1P06400 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RB1P06400 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RB1P06400 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RB1P06400 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RB1P06400 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RB1P06400 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.88■□□□□ 0.13
RB1P06400 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RB1P06400 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RB1P06400 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms