Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
MT-ND1P03886 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
MT-ND1P03886 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
MT-ND1P03886 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
MT-ND1P03886 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
MT-ND1P03886 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MT-ND1P03886 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
MT-ND1P03886 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.41□□□□□ -0.1
MT-ND1P03886 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.41□□□□□ -0.1
MT-ND1P03886 CEND1P1-201ENST00000451006 455 ntBASIC14.41□□□□□ -0.1
MT-ND1P03886 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.41□□□□□ -0.1
MT-ND1P03886 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
MT-ND1P03886 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.41□□□□□ -0.1
MT-ND1P03886 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.41□□□□□ -0.1
MT-ND1P03886 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.41□□□□□ -0.1
MT-ND1P03886 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.41□□□□□ -0.1
MT-ND1P03886 AC005829.1-201ENST00000570002 483 ntBASIC14.41□□□□□ -0.1
MT-ND1P03886 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
MT-ND1P03886 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.41□□□□□ -0.1
MT-ND1P03886 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
MT-ND1P03886 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
MT-ND1P03886 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.41□□□□□ -0.1
MT-ND1P03886 AC105339.1-204ENST00000636249 355 ntBASIC14.41□□□□□ -0.1
MT-ND1P03886 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
MT-ND1P03886 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.41□□□□□ -0.1
MT-ND1P03886 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MT-ND1P03886 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MT-ND1P03886 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MT-ND1P03886 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
MT-ND1P03886 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
MT-ND1P03886 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.41□□□□□ -0.1
MT-ND1P03886 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
MT-ND1P03886 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MT-ND1P03886 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
MT-ND1P03886 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
MT-ND1P03886 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.41□□□□□ -0.1
MT-ND1P03886 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MT-ND1P03886 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.41□□□□□ -0.1
MT-ND1P03886 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MT-ND1P03886 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.41□□□□□ -0.1
MT-ND1P03886 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MT-ND1P03886 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
MT-ND1P03886 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
MT-ND1P03886 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
MT-ND1P03886 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
MT-ND1P03886 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
MT-ND1P03886 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.4□□□□□ -0.1
MT-ND1P03886 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
MT-ND1P03886 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.4□□□□□ -0.1
MT-ND1P03886 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.4□□□□□ -0.1
MT-ND1P03886 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.4□□□□□ -0.1
MT-ND1P03886 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.4□□□□□ -0.1
MT-ND1P03886 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.4□□□□□ -0.1
MT-ND1P03886 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.4□□□□□ -0.1
MT-ND1P03886 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.4□□□□□ -0.1
MT-ND1P03886 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.4□□□□□ -0.1
MT-ND1P03886 AC022145.2-201ENST00000598203 171 ntBASIC14.4□□□□□ -0.1
MT-ND1P03886 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.4□□□□□ -0.1
MT-ND1P03886 MBLAC2-202ENST00000514906 1936 ntBASIC14.4□□□□□ -0.1
MT-ND1P03886 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
MT-ND1P03886 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.4□□□□□ -0.1
MT-ND1P03886 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
MT-ND1P03886 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MT-ND1P03886 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MT-ND1P03886 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms