Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
KRT6AP02538 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6AP02538 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6AP02538 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6AP02538 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
KRT6AP02538 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.79□□□□□ -0.04
KRT6AP02538 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6AP02538 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6AP02538 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
KRT6AP02538 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
KRT6AP02538 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6AP02538 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6AP02538 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6AP02538 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6AP02538 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6AP02538 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.79□□□□□ -0.04
KRT6AP02538 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.79□□□□□ -0.04
KRT6AP02538 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.79□□□□□ -0.04
KRT6AP02538 TSSK5P-201ENST00000423978 907 ntBASIC14.79□□□□□ -0.04
KRT6AP02538 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.79□□□□□ -0.04
KRT6AP02538 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6AP02538 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
KRT6AP02538 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.79□□□□□ -0.04
KRT6AP02538 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.79□□□□□ -0.04
KRT6AP02538 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6AP02538 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.79□□□□□ -0.04
KRT6AP02538 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.79□□□□□ -0.04
KRT6AP02538 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.79□□□□□ -0.04
KRT6AP02538 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.79□□□□□ -0.04
KRT6AP02538 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.79□□□□□ -0.04
KRT6AP02538 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6AP02538 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.79□□□□□ -0.04
KRT6AP02538 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6AP02538 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6AP02538 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6AP02538 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.79□□□□□ -0.04
KRT6AP02538 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6AP02538 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.79□□□□□ -0.04
KRT6AP02538 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
KRT6AP02538 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.79□□□□□ -0.04
KRT6AP02538 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.78□□□□□ -0.04
KRT6AP02538 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.78□□□□□ -0.04
KRT6AP02538 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KRT6AP02538 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.78□□□□□ -0.04
KRT6AP02538 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
KRT6AP02538 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
KRT6AP02538 INTS4P1-203ENST00000641008 3683 ntBASIC14.78□□□□□ -0.04
KRT6AP02538 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
KRT6AP02538 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KRT6AP02538 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
KRT6AP02538 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
KRT6AP02538 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.78□□□□□ -0.04
KRT6AP02538 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KRT6AP02538 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
KRT6AP02538 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.78□□□□□ -0.04
KRT6AP02538 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KRT6AP02538 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KRT6AP02538 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.78□□□□□ -0.04
KRT6AP02538 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.78□□□□□ -0.04
KRT6AP02538 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.78□□□□□ -0.04
KRT6AP02538 METTL21AP1-201ENST00000438852 635 ntBASIC14.78□□□□□ -0.04
KRT6AP02538 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.78□□□□□ -0.04
KRT6AP02538 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.78□□□□□ -0.04
KRT6AP02538 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KRT6AP02538 DUX4L27-201ENST00000554796 1261 ntBASIC14.78□□□□□ -0.04
KRT6AP02538 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.78□□□□□ -0.04
KRT6AP02538 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.78□□□□□ -0.04
KRT6AP02538 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.78□□□□□ -0.04
KRT6AP02538 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.78□□□□□ -0.04
KRT6AP02538 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.78□□□□□ -0.04
KRT6AP02538 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KRT6AP02538 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.78□□□□□ -0.04
KRT6AP02538 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.78□□□□□ -0.04
KRT6AP02538 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
KRT6AP02538 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.78□□□□□ -0.04
KRT6AP02538 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.78□□□□□ -0.04
KRT6AP02538 AL359258.3-201ENST00000622910 2331 ntBASIC14.78□□□□□ -0.04
KRT6AP02538 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.78□□□□□ -0.04
KRT6AP02538 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
KRT6AP02538 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KRT6AP02538 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
KRT6AP02538 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KRT6AP02538 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
KRT6AP02538 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.78□□□□□ -0.04
KRT6AP02538 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
KRT6AP02538 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
KRT6AP02538 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KRT6AP02538 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.78□□□□□ -0.04
KRT6AP02538 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KRT6AP02538 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.77□□□□□ -0.04
KRT6AP02538 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KRT6AP02538 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
KRT6AP02538 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.77□□□□□ -0.04
KRT6AP02538 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
KRT6AP02538 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.77□□□□□ -0.04
KRT6AP02538 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KRT6AP02538 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
KRT6AP02538 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.77□□□□□ -0.04
KRT6AP02538 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
KRT6AP02538 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms