Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DRAP01903 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HLA-DRAP01903 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DRAP01903 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HLA-DRAP01903 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRAP01903 LINC01101-201ENST00000622953 1884 ntBASIC16.31■□□□□ 0.2
HLA-DRAP01903 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRAP01903 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRAP01903 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HLA-DRAP01903 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRAP01903 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRAP01903 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.31■□□□□ 0.2
HLA-DRAP01903 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRAP01903 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRAP01903 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.31■□□□□ 0.2
HLA-DRAP01903 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HLA-DRAP01903 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.31■□□□□ 0.2
HLA-DRAP01903 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HLA-DRAP01903 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRAP01903 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRAP01903 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRAP01903 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRAP01903 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRAP01903 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
HLA-DRAP01903 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DRAP01903 KRT17P7-201ENST00000451704 1104 ntBASIC16.31■□□□□ 0.2
HLA-DRAP01903 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DRAP01903 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRAP01903 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.31■□□□□ 0.2
HLA-DRAP01903 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HLA-DRAP01903 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DRAP01903 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DRAP01903 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRAP01903 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.31■□□□□ 0.2
HLA-DRAP01903 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRAP01903 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRAP01903 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRAP01903 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRAP01903 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HLA-DRAP01903 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRAP01903 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRAP01903 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.3■□□□□ 0.2
HLA-DRAP01903 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.3■□□□□ 0.2
HLA-DRAP01903 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRAP01903 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
HLA-DRAP01903 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DRAP01903 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DRAP01903 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRAP01903 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRAP01903 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRAP01903 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRAP01903 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRAP01903 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRAP01903 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRAP01903 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HLA-DRAP01903 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DRAP01903 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
HLA-DRAP01903 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HLA-DRAP01903 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRAP01903 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.3■□□□□ 0.2
HLA-DRAP01903 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.3■□□□□ 0.2
HLA-DRAP01903 AL355864.2-201ENST00000447420 863 ntBASIC16.3■□□□□ 0.2
HLA-DRAP01903 BCRP2-202ENST00000447763 634 ntBASIC16.3■□□□□ 0.2
HLA-DRAP01903 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.3■□□□□ 0.2
HLA-DRAP01903 BCRP6-201ENST00000510112 632 ntBASIC16.3■□□□□ 0.2
HLA-DRAP01903 BCRP7-201ENST00000511549 544 ntBASIC16.3■□□□□ 0.2
HLA-DRAP01903 CR383656.12-201ENST00000549567 513 ntBASIC16.3■□□□□ 0.2
HLA-DRAP01903 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
HLA-DRAP01903 AC004466.1-201ENST00000599515 1080 ntBASIC16.3■□□□□ 0.2
HLA-DRAP01903 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRAP01903 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
HLA-DRAP01903 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.3■□□□□ 0.2
HLA-DRAP01903 AL603764.1-201ENST00000636452 321 ntBASIC16.3■□□□□ 0.2
HLA-DRAP01903 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HLA-DRAP01903 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRAP01903 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HLA-DRAP01903 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRAP01903 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRAP01903 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRAP01903 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRAP01903 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRAP01903 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DRAP01903 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRAP01903 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRAP01903 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DRAP01903 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRAP01903 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRAP01903 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
HLA-DRAP01903 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HLA-DRAP01903 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRAP01903 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.3■□□□□ 0.2
HLA-DRAP01903 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.3■□□□□ 0.2
HLA-DRAP01903 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRAP01903 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DRAP01903 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DRAP01903 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DRAP01903 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.29■□□□□ 0.2
HLA-DRAP01903 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HLA-DRAP01903 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms