Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.08□□□□□ -0.48
IFNA1P01562 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
IFNA1P01562 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
IFNA1P01562 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
IFNA1P01562 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.08□□□□□ -0.48
IFNA1P01562 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
IFNA1P01562 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
IFNA1P01562 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC12.08□□□□□ -0.48
IFNA1P01562 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
IFNA1P01562 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
IFNA1P01562 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.08□□□□□ -0.48
IFNA1P01562 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
IFNA1P01562 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
IFNA1P01562 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
IFNA1P01562 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
IFNA1P01562 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
IFNA1P01562 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
IFNA1P01562 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
IFNA1P01562 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
IFNA1P01562 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.08□□□□□ -0.48
IFNA1P01562 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
IFNA1P01562 IL11-204ENST00000590625 1028 ntTSL 2 BASIC12.08□□□□□ -0.48
IFNA1P01562 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC12.08□□□□□ -0.48
IFNA1P01562 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC12.08□□□□□ -0.48
IFNA1P01562 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.08□□□□□ -0.48
IFNA1P01562 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.08□□□□□ -0.48
IFNA1P01562 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
IFNA1P01562 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
IFNA1P01562 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.08□□□□□ -0.48
IFNA1P01562 AC105206.1-202ENST00000314927 2368 ntBASIC12.08□□□□□ -0.48
IFNA1P01562 AC073508.3-201ENST00000619697 1419 ntBASIC12.08□□□□□ -0.48
IFNA1P01562 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.08□□□□□ -0.48
IFNA1P01562 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
IFNA1P01562 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
IFNA1P01562 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
IFNA1P01562 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
IFNA1P01562 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
IFNA1P01562 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
IFNA1P01562 AC090114.2-201ENST00000608477 7054 ntBASIC12.08□□□□□ -0.48
IFNA1P01562 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
IFNA1P01562 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.07□□□□□ -0.48
IFNA1P01562 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
IFNA1P01562 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
IFNA1P01562 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
IFNA1P01562 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
IFNA1P01562 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
IFNA1P01562 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.07□□□□□ -0.48
IFNA1P01562 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
IFNA1P01562 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.07□□□□□ -0.48
IFNA1P01562 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.07□□□□□ -0.48
IFNA1P01562 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
IFNA1P01562 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC12.07□□□□□ -0.48
IFNA1P01562 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.07□□□□□ -0.48
IFNA1P01562 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.07□□□□□ -0.48
IFNA1P01562 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
IFNA1P01562 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
IFNA1P01562 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
IFNA1P01562 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
IFNA1P01562 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
IFNA1P01562 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
IFNA1P01562 AC005521.1-201ENST00000393351 872 ntBASIC12.07□□□□□ -0.48
IFNA1P01562 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
IFNA1P01562 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
IFNA1P01562 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
IFNA1P01562 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.07□□□□□ -0.48
IFNA1P01562 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
IFNA1P01562 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
IFNA1P01562 AC132008.2-207ENST00000454517 770 ntBASIC12.07□□□□□ -0.48
IFNA1P01562 TMEM198B-204ENST00000484016 896 ntBASIC12.07□□□□□ -0.48
IFNA1P01562 PRYP6-201ENST00000514804 343 ntBASIC12.07□□□□□ -0.48
IFNA1P01562 AC022447.6-201ENST00000515522 438 ntBASIC12.07□□□□□ -0.48
IFNA1P01562 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC12.07□□□□□ -0.48
IFNA1P01562 AC007787.1-201ENST00000588095 1583 ntBASIC12.07□□□□□ -0.48
IFNA1P01562 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.07□□□□□ -0.48
IFNA1P01562 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
IFNA1P01562 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC12.07□□□□□ -0.48
IFNA1P01562 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
IFNA1P01562 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
IFNA1P01562 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.07□□□□□ -0.48
IFNA1P01562 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
IFNA1P01562 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
IFNA1P01562 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
IFNA1P01562 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.07□□□□□ -0.48
IFNA1P01562 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
IFNA1P01562 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
IFNA1P01562 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC12.07□□□□□ -0.48
IFNA1P01562 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
IFNA1P01562 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
IFNA1P01562 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
IFNA1P01562 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
IFNA1P01562 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
IFNA1P01562 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.06□□□□□ -0.48
IFNA1P01562 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
IFNA1P01562 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
IFNA1P01562 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
IFNA1P01562 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
IFNA1P01562 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
IFNA1P01562 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.06□□□□□ -0.48
IFNA1P01562 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
IFNA1P01562 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms