Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AC004837.1-201ENST00000446267 564 ntBASIC16.12■□□□□ 0.17
TIMP1P01033 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.12■□□□□ 0.17
TIMP1P01033 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.12■□□□□ 0.17
TIMP1P01033 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TIMP1P01033 AP000911.2-201ENST00000534330 502 ntBASIC16.12■□□□□ 0.17
TIMP1P01033 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC16.12■□□□□ 0.17
TIMP1P01033 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TIMP1P01033 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.12■□□□□ 0.17
TIMP1P01033 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TIMP1P01033 MIR5196-201ENST00000578146 115 ntBASIC16.12■□□□□ 0.17
TIMP1P01033 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC16.12■□□□□ 0.17
TIMP1P01033 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC16.12■□□□□ 0.17
TIMP1P01033 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.12■□□□□ 0.17
TIMP1P01033 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.12■□□□□ 0.17
TIMP1P01033 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TIMP1P01033 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.12■□□□□ 0.17
TIMP1P01033 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.12■□□□□ 0.17
TIMP1P01033 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TIMP1P01033 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TIMP1P01033 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TIMP1P01033 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TIMP1P01033 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TIMP1P01033 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TIMP1P01033 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TIMP1P01033 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TIMP1P01033 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TIMP1P01033 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TIMP1P01033 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TIMP1P01033 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.11■□□□□ 0.17
TIMP1P01033 AD000864.1-201ENST00000624076 2295 ntBASIC16.11■□□□□ 0.17
TIMP1P01033 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.11■□□□□ 0.17
TIMP1P01033 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
TIMP1P01033 SALL4P5-201ENST00000419001 1760 ntBASIC16.11■□□□□ 0.17
TIMP1P01033 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TIMP1P01033 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TIMP1P01033 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TIMP1P01033 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TIMP1P01033 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TIMP1P01033 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TIMP1P01033 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.11■□□□□ 0.17
TIMP1P01033 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.11■□□□□ 0.17
TIMP1P01033 HLA-DMA-203ENST00000395305 777 ntBASIC16.11■□□□□ 0.17
TIMP1P01033 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TIMP1P01033 AL357563.1-201ENST00000404728 395 ntBASIC16.11■□□□□ 0.17
TIMP1P01033 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.11■□□□□ 0.17
TIMP1P01033 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC16.11■□□□□ 0.17
TIMP1P01033 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.11■□□□□ 0.17
TIMP1P01033 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.11■□□□□ 0.17
TIMP1P01033 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC16.11■□□□□ 0.17
TIMP1P01033 AC027237.1-201ENST00000560942 655 ntBASIC16.11■□□□□ 0.17
TIMP1P01033 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TIMP1P01033 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.11■□□□□ 0.17
TIMP1P01033 RN7SL596P-201ENST00000582123 288 ntBASIC16.11■□□□□ 0.17
TIMP1P01033 AC138466.5-201ENST00000624002 808 ntBASIC16.11■□□□□ 0.17
TIMP1P01033 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.11■□□□□ 0.17
TIMP1P01033 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TIMP1P01033 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TIMP1P01033 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TIMP1P01033 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TIMP1P01033 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
TIMP1P01033 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TIMP1P01033 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TIMP1P01033 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TIMP1P01033 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.11■□□□□ 0.17
TIMP1P01033 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.11■□□□□ 0.17
TIMP1P01033 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TIMP1P01033 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TIMP1P01033 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TIMP1P01033 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TIMP1P01033 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TIMP1P01033 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.1■□□□□ 0.17
TIMP1P01033 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.1■□□□□ 0.17
TIMP1P01033 CROCCP1-201ENST00000426910 5675 ntBASIC16.1■□□□□ 0.17
TIMP1P01033 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC16.1■□□□□ 0.17
TIMP1P01033 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TIMP1P01033 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TIMP1P01033 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TIMP1P01033 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TIMP1P01033 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TIMP1P01033 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TIMP1P01033 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TIMP1P01033 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TIMP1P01033 KRT18P36-201ENST00000411618 1276 ntBASIC16.1■□□□□ 0.17
TIMP1P01033 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC16.1■□□□□ 0.17
TIMP1P01033 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TIMP1P01033 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC16.1■□□□□ 0.17
TIMP1P01033 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TIMP1P01033 GCOM2-201ENST00000509133 1104 ntBASIC16.1■□□□□ 0.17
TIMP1P01033 CR383656.3-201ENST00000551315 183 ntBASIC16.1■□□□□ 0.17
TIMP1P01033 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC16.1■□□□□ 0.17
TIMP1P01033 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.1■□□□□ 0.17
TIMP1P01033 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.1■□□□□ 0.17
TIMP1P01033 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.1■□□□□ 0.17
TIMP1P01033 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
TIMP1P01033 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.1■□□□□ 0.17
TIMP1P01033 IL9RP3-201ENST00000442856 1674 ntBASIC16.1■□□□□ 0.17
TIMP1P01033 AHCYP4-201ENST00000419201 1315 ntBASIC16.1■□□□□ 0.17
TIMP1P01033 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
TIMP1P01033 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TIMP1P01033 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms