Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.39□□□□□ -0.11
SNX4O95219 AC018892.3-201ENST00000623986 2499 ntBASIC14.39□□□□□ -0.11
SNX4O95219 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.39□□□□□ -0.11
SNX4O95219 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SNX4O95219 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SNX4O95219 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX4O95219 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
SNX4O95219 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.39□□□□□ -0.11
SNX4O95219 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX4O95219 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX4O95219 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX4O95219 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX4O95219 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX4O95219 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SNX4O95219 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.39□□□□□ -0.11
SNX4O95219 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.39□□□□□ -0.11
SNX4O95219 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.39□□□□□ -0.11
SNX4O95219 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.39□□□□□ -0.11
SNX4O95219 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.39□□□□□ -0.11
SNX4O95219 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.39□□□□□ -0.11
SNX4O95219 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.39□□□□□ -0.11
SNX4O95219 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.39□□□□□ -0.11
SNX4O95219 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.39□□□□□ -0.11
SNX4O95219 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.39□□□□□ -0.11
SNX4O95219 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.39□□□□□ -0.11
SNX4O95219 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX4O95219 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SNX4O95219 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.39□□□□□ -0.11
SNX4O95219 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SNX4O95219 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX4O95219 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.39□□□□□ -0.11
SNX4O95219 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SNX4O95219 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX4O95219 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX4O95219 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX4O95219 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SNX4O95219 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX4O95219 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.39□□□□□ -0.11
SNX4O95219 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX4O95219 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SNX4O95219 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SNX4O95219 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX4O95219 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SNX4O95219 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
SNX4O95219 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.38□□□□□ -0.11
SNX4O95219 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 AL589987.1-201ENST00000453380 819 ntBASIC14.38□□□□□ -0.11
SNX4O95219 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.38□□□□□ -0.11
SNX4O95219 AC104596.2-201ENST00000512793 793 ntBASIC14.38□□□□□ -0.11
SNX4O95219 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.38□□□□□ -0.11
SNX4O95219 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
SNX4O95219 AC036164.1-201ENST00000570544 333 ntBASIC14.38□□□□□ -0.11
SNX4O95219 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.38□□□□□ -0.11
SNX4O95219 MIR4313-201ENST00000580760 101 ntBASIC14.38□□□□□ -0.11
SNX4O95219 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
SNX4O95219 AC093726.1-201ENST00000608064 963 ntBASIC14.38□□□□□ -0.11
SNX4O95219 AC004790.1-201ENST00000612686 536 ntBASIC14.38□□□□□ -0.11
SNX4O95219 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
SNX4O95219 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SNX4O95219 BEND3P1-201ENST00000421591 1944 ntBASIC14.38□□□□□ -0.11
SNX4O95219 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SNX4O95219 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SNX4O95219 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.38□□□□□ -0.11
SNX4O95219 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SNX4O95219 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SNX4O95219 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SNX4O95219 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SNX4O95219 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX4O95219 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SNX4O95219 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX4O95219 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SNX4O95219 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX4O95219 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms