Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
BEST1O76090 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BEST1O76090 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST1O76090 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BEST1O76090 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
BEST1O76090 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST1O76090 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.87■□□□□ 0.13
BEST1O76090 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
BEST1O76090 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST1O76090 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BEST1O76090 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.87■□□□□ 0.13
BEST1O76090 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.87■□□□□ 0.13
BEST1O76090 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.87■□□□□ 0.13
BEST1O76090 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.87■□□□□ 0.13
BEST1O76090 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.87■□□□□ 0.13
BEST1O76090 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BEST1O76090 AC023310.1-201ENST00000554836 735 ntBASIC15.87■□□□□ 0.13
BEST1O76090 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
BEST1O76090 DUX4L45-201ENST00000566406 1057 ntBASIC15.87■□□□□ 0.13
BEST1O76090 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.87■□□□□ 0.13
BEST1O76090 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.87■□□□□ 0.13
BEST1O76090 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
BEST1O76090 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.87■□□□□ 0.13
BEST1O76090 AC073413.1-201ENST00000603927 732 ntBASIC15.87■□□□□ 0.13
BEST1O76090 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST1O76090 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.87■□□□□ 0.13
BEST1O76090 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BEST1O76090 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
BEST1O76090 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST1O76090 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.87■□□□□ 0.13
BEST1O76090 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST1O76090 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST1O76090 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST1O76090 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST1O76090 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BEST1O76090 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BEST1O76090 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST1O76090 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST1O76090 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST1O76090 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BEST1O76090 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.87■□□□□ 0.13
BEST1O76090 AC009093.2-202ENST00000620513 2079 ntBASIC15.87■□□□□ 0.13
BEST1O76090 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.86■□□□□ 0.13
BEST1O76090 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.86■□□□□ 0.13
BEST1O76090 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.86■□□□□ 0.13
BEST1O76090 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 CICP23-201ENST00000605013 2741 ntBASIC15.86■□□□□ 0.13
BEST1O76090 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 RN7SKP230-201ENST00000365642 335 ntBASIC15.86■□□□□ 0.13
BEST1O76090 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.86■□□□□ 0.13
BEST1O76090 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.86■□□□□ 0.13
BEST1O76090 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
BEST1O76090 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.86■□□□□ 0.13
BEST1O76090 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
BEST1O76090 YBX1P6-201ENST00000442962 1002 ntBASIC15.86■□□□□ 0.13
BEST1O76090 CNN2P10-201ENST00000443067 918 ntBASIC15.86■□□□□ 0.13
BEST1O76090 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.86■□□□□ 0.13
BEST1O76090 FTLP10-202ENST00000505798 471 ntBASIC15.86■□□□□ 0.13
BEST1O76090 COX5BP1-201ENST00000507622 393 ntBASIC15.86■□□□□ 0.13
BEST1O76090 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.86■□□□□ 0.13
BEST1O76090 MIR4741-201ENST00000579822 90 ntBASIC15.86■□□□□ 0.13
BEST1O76090 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.86■□□□□ 0.13
BEST1O76090 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
BEST1O76090 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 FKBP4P6-201ENST00000457486 1332 ntBASIC15.86■□□□□ 0.13
BEST1O76090 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
BEST1O76090 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.86■□□□□ 0.13
BEST1O76090 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
BEST1O76090 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
BEST1O76090 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.85■□□□□ 0.13
BEST1O76090 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST1O76090 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.85■□□□□ 0.13
BEST1O76090 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
BEST1O76090 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.85■□□□□ 0.13
BEST1O76090 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms