Protein–RNA interactions for Protein: O60784

TOM1, Target of Myb protein 1, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1O60784 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TOM1O60784 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC20.18■□□□□ 0.82
TOM1O60784 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC20.18■□□□□ 0.82
TOM1O60784 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOM1O60784 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.18■□□□□ 0.82
TOM1O60784 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC20.18■□□□□ 0.82
TOM1O60784 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOM1O60784 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOM1O60784 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC20.18■□□□□ 0.82
TOM1O60784 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC20.18■□□□□ 0.82
TOM1O60784 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC20.18■□□□□ 0.82
TOM1O60784 NRADDP-201ENST00000437305 691 ntBASIC20.18■□□□□ 0.82
TOM1O60784 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TOM1O60784 SEPHS2P1-201ENST00000511618 1162 ntBASIC20.18■□□□□ 0.82
TOM1O60784 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC20.18■□□□□ 0.82
TOM1O60784 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC20.18■□□□□ 0.82
TOM1O60784 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC20.18■□□□□ 0.82
TOM1O60784 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC20.18■□□□□ 0.82
TOM1O60784 COX5A-205ENST00000568517 582 ntTSL 3 BASIC20.18■□□□□ 0.82
TOM1O60784 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC20.18■□□□□ 0.82
TOM1O60784 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TOM1O60784 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOM1O60784 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOM1O60784 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TOM1O60784 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC20.18■□□□□ 0.82
TOM1O60784 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOM1O60784 OR6D1P-202ENST00000641007 5290 ntBASIC20.18■□□□□ 0.82
TOM1O60784 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TOM1O60784 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOM1O60784 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.18■□□□□ 0.82
TOM1O60784 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TOM1O60784 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
TOM1O60784 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOM1O60784 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOM1O60784 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.18■□□□□ 0.82
TOM1O60784 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOM1O60784 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TOM1O60784 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC20.17■□□□□ 0.82
TOM1O60784 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TOM1O60784 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOM1O60784 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOM1O60784 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOM1O60784 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC20.17■□□□□ 0.82
TOM1O60784 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC20.17■□□□□ 0.82
TOM1O60784 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOM1O60784 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.17■□□□□ 0.82
TOM1O60784 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOM1O60784 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TOM1O60784 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOM1O60784 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOM1O60784 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TOM1O60784 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC20.17■□□□□ 0.82
TOM1O60784 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC20.17■□□□□ 0.82
TOM1O60784 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TOM1O60784 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TOM1O60784 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC20.17■□□□□ 0.82
TOM1O60784 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOM1O60784 RN7SL147P-201ENST00000487345 298 ntBASIC20.17■□□□□ 0.82
TOM1O60784 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC20.17■□□□□ 0.82
TOM1O60784 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC20.17■□□□□ 0.82
TOM1O60784 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC20.17■□□□□ 0.82
TOM1O60784 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOM1O60784 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC20.17■□□□□ 0.82
TOM1O60784 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOM1O60784 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TOM1O60784 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOM1O60784 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TOM1O60784 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TOM1O60784 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOM1O60784 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOM1O60784 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOM1O60784 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TOM1O60784 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC20.16■□□□□ 0.82
TOM1O60784 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC20.16■□□□□ 0.82
TOM1O60784 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TOM1O60784 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TOM1O60784 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.16■□□□□ 0.82
TOM1O60784 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TOM1O60784 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TOM1O60784 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC20.16■□□□□ 0.82
TOM1O60784 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TOM1O60784 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TOM1O60784 TKT-202ENST00000423516 2075 ntTSL 2 BASIC20.16■□□□□ 0.82
TOM1O60784 CFL1P6-201ENST00000400899 494 ntBASIC20.16■□□□□ 0.82
TOM1O60784 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC20.16■□□□□ 0.82
TOM1O60784 AL137244.1-201ENST00000422931 865 ntBASIC20.16■□□□□ 0.82
TOM1O60784 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TOM1O60784 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC20.16■□□□□ 0.82
TOM1O60784 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
TOM1O60784 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TOM1O60784 AC120498.5-201ENST00000561757 299 ntBASIC20.16■□□□□ 0.82
TOM1O60784 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC20.16■□□□□ 0.82
TOM1O60784 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC20.16■□□□□ 0.82
TOM1O60784 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC20.16■□□□□ 0.82
TOM1O60784 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC20.16■□□□□ 0.82
TOM1O60784 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TOM1O60784 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TOM1O60784 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TOM1O60784 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
TOM1O60784 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms