Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
E2F3O00716 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
E2F3O00716 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
E2F3O00716 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
E2F3O00716 AC007541.1-201ENST00000570282 1469 ntBASIC14.85□□□□□ -0.03
E2F3O00716 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
E2F3O00716 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
E2F3O00716 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
E2F3O00716 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.85□□□□□ -0.03
E2F3O00716 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.85□□□□□ -0.03
E2F3O00716 RARRES2P5-201ENST00000564013 466 ntBASIC14.85□□□□□ -0.03
E2F3O00716 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
E2F3O00716 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.85□□□□□ -0.03
E2F3O00716 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.85□□□□□ -0.03
E2F3O00716 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.85□□□□□ -0.03
E2F3O00716 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
E2F3O00716 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.85□□□□□ -0.03
E2F3O00716 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.85□□□□□ -0.03
E2F3O00716 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
E2F3O00716 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.85□□□□□ -0.03
E2F3O00716 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
E2F3O00716 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.85□□□□□ -0.03
E2F3O00716 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.85□□□□□ -0.03
E2F3O00716 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
E2F3O00716 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
E2F3O00716 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
E2F3O00716 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
E2F3O00716 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.85□□□□□ -0.03
E2F3O00716 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.85□□□□□ -0.03
E2F3O00716 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
E2F3O00716 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
E2F3O00716 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
E2F3O00716 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
E2F3O00716 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
E2F3O00716 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
E2F3O00716 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.84□□□□□ -0.03
E2F3O00716 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
E2F3O00716 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.84□□□□□ -0.03
E2F3O00716 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
E2F3O00716 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
E2F3O00716 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
E2F3O00716 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
E2F3O00716 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
E2F3O00716 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
E2F3O00716 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
E2F3O00716 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
E2F3O00716 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.84□□□□□ -0.03
E2F3O00716 AL353779.1-201ENST00000434793 351 ntBASIC14.84□□□□□ -0.03
E2F3O00716 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.84□□□□□ -0.03
E2F3O00716 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
E2F3O00716 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.84□□□□□ -0.03
E2F3O00716 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.84□□□□□ -0.03
E2F3O00716 GPR53P-205ENST00000457298 1084 ntBASIC14.84□□□□□ -0.03
E2F3O00716 FAM86LP-201ENST00000478302 853 ntBASIC14.84□□□□□ -0.03
E2F3O00716 AC026410.3-201ENST00000514280 936 ntBASIC14.84□□□□□ -0.03
E2F3O00716 IGHV3-71-201ENST00000523324 359 ntBASIC14.84□□□□□ -0.03
E2F3O00716 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.84□□□□□ -0.03
E2F3O00716 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.84□□□□□ -0.03
E2F3O00716 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.84□□□□□ -0.03
E2F3O00716 AC036164.1-201ENST00000570544 333 ntBASIC14.84□□□□□ -0.03
E2F3O00716 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.84□□□□□ -0.03
E2F3O00716 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
E2F3O00716 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
E2F3O00716 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
E2F3O00716 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
E2F3O00716 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
E2F3O00716 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.84□□□□□ -0.03
E2F3O00716 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
E2F3O00716 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
E2F3O00716 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
E2F3O00716 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
E2F3O00716 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.84□□□□□ -0.03
E2F3O00716 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
E2F3O00716 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
E2F3O00716 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
E2F3O00716 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
E2F3O00716 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
E2F3O00716 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
E2F3O00716 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
E2F3O00716 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
E2F3O00716 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
E2F3O00716 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
E2F3O00716 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.83□□□□□ -0.04
E2F3O00716 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
E2F3O00716 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
E2F3O00716 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
E2F3O00716 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
E2F3O00716 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
E2F3O00716 AC098614.1-201ENST00000368528 745 ntBASIC14.83□□□□□ -0.04
E2F3O00716 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
E2F3O00716 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
E2F3O00716 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
E2F3O00716 HLA-K-203ENST00000430151 1046 ntBASIC14.83□□□□□ -0.04
E2F3O00716 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.83□□□□□ -0.04
E2F3O00716 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.83□□□□□ -0.04
E2F3O00716 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
E2F3O00716 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.83□□□□□ -0.04
E2F3O00716 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.83□□□□□ -0.04
E2F3O00716 AC023310.3-201ENST00000557027 670 ntBASIC14.83□□□□□ -0.04
E2F3O00716 AC100756.1-201ENST00000562736 682 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms