Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 MIR770-201ENST00000390219 98 ntBASIC14.93□□□□□ -0.02
CDC7O00311 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDC7O00311 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDC7O00311 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.93□□□□□ -0.02
CDC7O00311 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDC7O00311 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.93□□□□□ -0.02
CDC7O00311 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDC7O00311 AC055876.2-201ENST00000531834 546 ntBASIC14.93□□□□□ -0.02
CDC7O00311 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.93□□□□□ -0.02
CDC7O00311 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.93□□□□□ -0.02
CDC7O00311 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.93□□□□□ -0.02
CDC7O00311 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CDC7O00311 AC120045.2-201ENST00000567334 178 ntBASIC14.93□□□□□ -0.02
CDC7O00311 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.93□□□□□ -0.02
CDC7O00311 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.93□□□□□ -0.02
CDC7O00311 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDC7O00311 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.93□□□□□ -0.02
CDC7O00311 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDC7O00311 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDC7O00311 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDC7O00311 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDC7O00311 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDC7O00311 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDC7O00311 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.93□□□□□ -0.02
CDC7O00311 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDC7O00311 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDC7O00311 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
CDC7O00311 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDC7O00311 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC7O00311 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CDC7O00311 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CDC7O00311 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC7O00311 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC7O00311 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC7O00311 INTS4P2-202ENST00000614726 2019 ntBASIC14.92□□□□□ -0.02
CDC7O00311 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.92□□□□□ -0.02
CDC7O00311 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.92□□□□□ -0.02
CDC7O00311 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC7O00311 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC7O00311 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC7O00311 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC7O00311 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC7O00311 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC7O00311 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC7O00311 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDC7O00311 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
CDC7O00311 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDC7O00311 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CDC7O00311 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC7O00311 AC098850.1-201ENST00000419919 790 ntBASIC14.92□□□□□ -0.02
CDC7O00311 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.92□□□□□ -0.02
CDC7O00311 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.92□□□□□ -0.02
CDC7O00311 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.92□□□□□ -0.02
CDC7O00311 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.92□□□□□ -0.02
CDC7O00311 RPL13AP25-201ENST00000484130 612 ntBASIC14.92□□□□□ -0.02
CDC7O00311 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.92□□□□□ -0.02
CDC7O00311 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.92□□□□□ -0.02
CDC7O00311 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.92□□□□□ -0.02
CDC7O00311 AC093813.1-201ENST00000605066 256 ntBASIC14.92□□□□□ -0.02
CDC7O00311 AC099568.2-201ENST00000609194 695 ntBASIC14.92□□□□□ -0.02
CDC7O00311 AC009118.2-201ENST00000613275 655 ntBASIC14.92□□□□□ -0.02
CDC7O00311 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.92□□□□□ -0.02
CDC7O00311 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CDC7O00311 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.92□□□□□ -0.02
CDC7O00311 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC7O00311 AC097359.2-201ENST00000604992 2389 ntBASIC14.92□□□□□ -0.02
CDC7O00311 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDC7O00311 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDC7O00311 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC7O00311 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CDC7O00311 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC7O00311 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC7O00311 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC7O00311 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC7O00311 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
CDC7O00311 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC7O00311 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.92□□□□□ -0.02
CDC7O00311 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDC7O00311 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
CDC7O00311 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CDC7O00311 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.92□□□□□ -0.02
CDC7O00311 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC7O00311 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CDC7O00311 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC7O00311 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC7O00311 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
CDC7O00311 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CDC7O00311 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.91□□□□□ -0.02
CDC7O00311 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC7O00311 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC7O00311 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC7O00311 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC7O00311 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.91□□□□□ -0.02
CDC7O00311 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC7O00311 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC7O00311 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
CDC7O00311 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CDC7O00311 AC005089.1-201ENST00000619486 2241 ntBASIC14.91□□□□□ -0.02
CDC7O00311 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDC7O00311 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms