Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AL591846.1-201ENST00000451736 433 ntBASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AC104306.2-201ENST00000451877 341 ntBASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 MIR6787-201ENST00000616675 61 ntBASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.16■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AL359258.3-201ENST00000622910 2331 ntBASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 HYMAI-201ENST00000635591 3347 ntBASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AC099548.2-209ENST00000480264 625 ntBASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AC104982.3-201ENST00000581995 514 ntBASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 AC244093.1-201ENST00000610837 814 ntBASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 GPR182-203ENST00000622922 591 ntBASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 MROH4P-201ENST00000431302 1578 ntBASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C1QTNF3-AMACRE9PGA6 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.14■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.14■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.14■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
C1QTNF3-AMACRE9PGA6 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms