Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 AL353779.1-201ENST00000434793 351 ntBASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 API5-211ENST00000534695 560 ntTSL 5 BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 AC092552.1-201ENST00000547243 906 ntBASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 AL359711.2-201ENST00000563105 872 ntBASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TRIM6-TRIM34B2RNG4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.64■□□□□ 0.58
TRIM6-TRIM34B2RNG4 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC18.64■□□□□ 0.58
TRIM6-TRIM34B2RNG4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM6-TRIM34B2RNG4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM6-TRIM34B2RNG4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.64■□□□□ 0.58
TRIM6-TRIM34B2RNG4 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM6-TRIM34B2RNG4 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 C1QBPP1-201ENST00000400117 770 ntBASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 AC093813.1-201ENST00000605066 256 ntBASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 AL360270.3-201ENST00000609118 1348 ntBASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 AC093525.8-201ENST00000624099 1342 ntBASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 LILRP1-201ENST00000444199 1370 ntBASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM6-TRIM34B2RNG4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM6-TRIM34B2RNG4 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TRIM6-TRIM34B2RNG4 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6-TRIM34B2RNG4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6-TRIM34B2RNG4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM6-TRIM34B2RNG4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM6-TRIM34B2RNG4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6-TRIM34B2RNG4 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6-TRIM34B2RNG4 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6-TRIM34B2RNG4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TRIM6-TRIM34B2RNG4 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM6-TRIM34B2RNG4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6-TRIM34B2RNG4 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6-TRIM34B2RNG4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6-TRIM34B2RNG4 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6-TRIM34B2RNG4 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM6-TRIM34B2RNG4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6-TRIM34B2RNG4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6-TRIM34B2RNG4 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6-TRIM34B2RNG4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6-TRIM34B2RNG4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TRIM6-TRIM34B2RNG4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM6-TRIM34B2RNG4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM6-TRIM34B2RNG4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.63■□□□□ 0.57
TRIM6-TRIM34B2RNG4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.63■□□□□ 0.57
TRIM6-TRIM34B2RNG4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms