Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 CYP2AB1P-202ENST00000454440 1456 ntBASIC10.69□□□□□ -0.7
LINC01546A6NGU7 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 AC034105.1-201ENST00000563488 319 ntBASIC10.69□□□□□ -0.7
LINC01546A6NGU7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 AC099522.2-201ENST00000607001 744 ntBASIC10.69□□□□□ -0.7
LINC01546A6NGU7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 DLX4-206ENST00000611342 1662 ntBASIC10.69□□□□□ -0.7
LINC01546A6NGU7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LINC01546A6NGU7 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 AC025580.3-201ENST00000617932 1424 ntBASIC10.68□□□□□ -0.7
LINC01546A6NGU7 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 API5-203ENST00000455725 2257 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 Z82170.1-201ENST00000625081 3192 ntBASIC10.68□□□□□ -0.7
LINC01546A6NGU7 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC10.68□□□□□ -0.7
LINC01546A6NGU7 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms