Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 AC012508.2-201ENST00000567613 1472 ntBASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 MIR663B-201ENST00000408361 115 ntBASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 GHSR-202ENST00000427970 912 ntBASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 AC026434.2-201ENST00000506094 1078 ntBASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 AL139099.5-201ENST00000635274 300 ntBASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.09■□□□□ 0.01
TBC1D3FA6NER0 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
TBC1D3FA6NER0 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.08■□□□□ 0.01
TBC1D3FA6NER0 AL137783.1-201ENST00000623494 1896 ntBASIC15.08■□□□□ 0.01
TBC1D3FA6NER0 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TBC1D3FA6NER0 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TBC1D3FA6NER0 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.08■□□□□ 0
TBC1D3FA6NER0 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.08■□□□□ 0
TBC1D3FA6NER0 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TBC1D3FA6NER0 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TBC1D3FA6NER0 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TBC1D3FA6NER0 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.08■□□□□ 0
TBC1D3FA6NER0 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.08■□□□□ 0
TBC1D3FA6NER0 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.08■□□□□ 0
TBC1D3FA6NER0 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TBC1D3FA6NER0 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.08■□□□□ 0
TBC1D3FA6NER0 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TBC1D3FA6NER0 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.08■□□□□ 0
TBC1D3FA6NER0 POM121L10P-201ENST00000436994 1285 ntBASIC15.08■□□□□ 0
TBC1D3FA6NER0 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TBC1D3FA6NER0 HSPB1P2-201ENST00000448722 546 ntBASIC15.08■□□□□ 0
TBC1D3FA6NER0 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.08■□□□□ 0
TBC1D3FA6NER0 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.08■□□□□ 0
TBC1D3FA6NER0 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.08■□□□□ 0
TBC1D3FA6NER0 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TBC1D3FA6NER0 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.08■□□□□ 0
TBC1D3FA6NER0 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.08■□□□□ 0
TBC1D3FA6NER0 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.08■□□□□ 0
TBC1D3FA6NER0 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.08■□□□□ 0
TBC1D3FA6NER0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TBC1D3FA6NER0 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.08■□□□□ 0
TBC1D3FA6NER0 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TBC1D3FA6NER0 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.08■□□□□ 0
TBC1D3FA6NER0 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms