Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 KRT17P8-201ENST00000540749 863 ntBASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 HILS1-202ENST00000545329 423 ntBASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC097359.3-201ENST00000603982 1210 ntBASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC133539.2-201ENST00000604757 467 ntBASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC017083.2-201ENST00000608069 979 ntBASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 WASH3P-207ENST00000560956 1394 ntBASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC023908.3-201ENST00000564211 3047 ntBASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.29□□□□□ -0.44
TCRBV4S1A1TA0A5B7 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC005089.1-201ENST00000619486 2241 ntBASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 RPL13P2-201ENST00000440687 659 ntBASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SLED1-202ENST00000512051 380 ntBASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AL162274.1-201ENST00000617191 1098 ntBASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AL158212.4-201ENST00000624062 1286 ntBASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AC067750.1-201ENST00000608826 6545 ntBASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TCRBV4S1A1TA0A5B7 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.27□□□□□ -0.44
TCRBV4S1A1TA0A5B7 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TCRBV4S1A1TA0A5B7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TCRBV4S1A1TA0A5B7 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TCRBV4S1A1TA0A5B7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
TCRBV4S1A1TA0A5B7 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
TCRBV4S1A1TA0A5B7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TCRBV4S1A1TA0A5B7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.27□□□□□ -0.44
TCRBV4S1A1TA0A5B7 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
TCRBV4S1A1TA0A5B7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
TCRBV4S1A1TA0A5B7 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TCRBV4S1A1TA0A5B7 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TCRBV4S1A1TA0A5B7 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.27□□□□□ -0.44
TCRBV4S1A1TA0A5B7 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 AC136604.1-201ENST00000418535 575 ntBASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
TCRBV4S1A1TA0A5B7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms