Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
DUXBA0A1W2PPF3 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
DUXBA0A1W2PPF3 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
DUXBA0A1W2PPF3 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
DUXBA0A1W2PPF3 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
DUXBA0A1W2PPF3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
DUXBA0A1W2PPF3 AC104109.2-201ENST00000602919 1418 ntBASIC12.45□□□□□ -0.42
DUXBA0A1W2PPF3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
DUXBA0A1W2PPF3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.45□□□□□ -0.42
DUXBA0A1W2PPF3 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
DUXBA0A1W2PPF3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
DUXBA0A1W2PPF3 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.45□□□□□ -0.42
DUXBA0A1W2PPF3 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
DUXBA0A1W2PPF3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
DUXBA0A1W2PPF3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 TCAM1P-207ENST00000485295 1537 ntBASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 UXT-AS1-201ENST00000590504 1525 ntBASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 AC007967.2-201ENST00000432613 625 ntBASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 TMEM198B-204ENST00000484016 896 ntBASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 RNA5SP416-201ENST00000516838 111 ntBASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 SLC25A39P2-201ENST00000537614 270 ntBASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 Z97205.2-201ENST00000564697 1639 ntBASIC12.44□□□□□ -0.42
DUXBA0A1W2PPF3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
DUXBA0A1W2PPF3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.43□□□□□ -0.42
DUXBA0A1W2PPF3 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.43□□□□□ -0.42
DUXBA0A1W2PPF3 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
DUXBA0A1W2PPF3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.43□□□□□ -0.42
DUXBA0A1W2PPF3 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.43□□□□□ -0.42
DUXBA0A1W2PPF3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.43□□□□□ -0.42
DUXBA0A1W2PPF3 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
DUXBA0A1W2PPF3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
DUXBA0A1W2PPF3 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
DUXBA0A1W2PPF3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.43□□□□□ -0.42
DUXBA0A1W2PPF3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
DUXBA0A1W2PPF3 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
DUXBA0A1W2PPF3 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
DUXBA0A1W2PPF3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
DUXBA0A1W2PPF3 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
DUXBA0A1W2PPF3 AGGF1P1-201ENST00000509500 2073 ntBASIC12.43□□□□□ -0.42
DUXBA0A1W2PPF3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
DUXBA0A1W2PPF3 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
DUXBA0A1W2PPF3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms