Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP3Q9Y2W7 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 AC098831.1-202ENST00000438821 336 ntBASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 AC027307.2-201ENST00000591252 911 ntBASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 AC068137.2-201ENST00000605408 478 ntBASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 AC118758.2-201ENST00000614242 2813 ntBASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 AC097359.2-201ENST00000604992 2389 ntBASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 AKAP8P1-201ENST00000434743 1349 ntBASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KCNIP3Q9Y2W7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 FOXO1B-201ENST00000504678 1527 ntBASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 HLA-H-201ENST00000383620 1096 ntBASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 AC093909.1-201ENST00000504731 1122 ntBASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
KCNIP3Q9Y2W7 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms