Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LEMD3Q9Y2U8 AC023090.2-201ENST00000625182 2110 ntBASIC18.25■□□□□ 0.51
LEMD3Q9Y2U8 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
LEMD3Q9Y2U8 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 CMC1-204ENST00000423894 549 ntTSL 2 BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 PTPA-217ENST00000434095 870 ntTSL 2 BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 MAGEA5-201ENST00000446757 942 ntBASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 AC009779.1-201ENST00000551138 283 ntBASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 Z98259.2-201ENST00000641583 609 ntBASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.24■□□□□ 0.51
LEMD3Q9Y2U8 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 C18orf15-201ENST00000623680 2534 ntBASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 WASH3P-207ENST00000560956 1394 ntBASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 SKA2-202ENST00000437036 625 ntTSL 2 BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 MIR3907-201ENST00000579424 151 ntBASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 AC009884.2-201ENST00000603110 324 ntBASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LEMD3Q9Y2U8 AC023024.2-201ENST00000623561 1993 ntBASIC18.22■□□□□ 0.51
LEMD3Q9Y2U8 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LEMD3Q9Y2U8 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LEMD3Q9Y2U8 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LEMD3Q9Y2U8 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
LEMD3Q9Y2U8 SALL4P5-201ENST00000419001 1760 ntBASIC18.22■□□□□ 0.51
LEMD3Q9Y2U8 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LEMD3Q9Y2U8 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LEMD3Q9Y2U8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LEMD3Q9Y2U8 FAM90A7P-201ENST00000382628 1395 ntBASIC18.22■□□□□ 0.51
LEMD3Q9Y2U8 FAM90A23P-201ENST00000400136 1395 ntBASIC18.22■□□□□ 0.51
LEMD3Q9Y2U8 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LEMD3Q9Y2U8 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
LEMD3Q9Y2U8 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC18.22■□□□□ 0.51
LEMD3Q9Y2U8 HINT2P1-201ENST00000419438 481 ntBASIC18.22■□□□□ 0.51
LEMD3Q9Y2U8 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC18.22■□□□□ 0.51
LEMD3Q9Y2U8 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms