Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DTX4Q9Y2E6 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
DTX4Q9Y2E6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
DTX4Q9Y2E6 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
DTX4Q9Y2E6 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
DTX4Q9Y2E6 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.09□□□□□ -0.15
DTX4Q9Y2E6 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
DTX4Q9Y2E6 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
DTX4Q9Y2E6 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
DTX4Q9Y2E6 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DTX4Q9Y2E6 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
DTX4Q9Y2E6 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
DTX4Q9Y2E6 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.08□□□□□ -0.15
DTX4Q9Y2E6 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 AC023090.2-201ENST00000625182 2110 ntBASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 BCRP2-202ENST00000447763 634 ntBASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 BCRP6-201ENST00000510112 632 ntBASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 BCRP7-201ENST00000511549 544 ntBASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 SLC25A47P1-201ENST00000531577 414 ntBASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 CR383656.12-201ENST00000549567 513 ntBASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 DUX4L47-201ENST00000566374 394 ntBASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 AC015936.2-201ENST00000593177 259 ntBASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 AC145423.3-201ENST00000615987 467 ntBASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.08□□□□□ -0.16
DTX4Q9Y2E6 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 FGD5P1-202ENST00000614866 2498 ntBASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DTX4Q9Y2E6 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms