Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 AC133552.6-201ENST00000613406 534 ntBASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 COX11-210ENST00000639671 696 ntBASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 FAM45BP-202ENST00000592932 1624 ntBASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 AC012508.2-201ENST00000567613 1472 ntBASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
CUEDC1Q9NWM3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 BOLA2P3-201ENST00000404566 256 ntBASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 RN7SL837P-201ENST00000463010 287 ntBASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 BX539320.1-201ENST00000623759 877 ntBASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
CUEDC1Q9NWM3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 WASH3P-207ENST00000560956 1394 ntBASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CUEDC1Q9NWM3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms