Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HPS4Q9NQG7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.75■□□□□ 0.11
HPS4Q9NQG7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 KRT8P14-201ENST00000414254 1442 ntBASIC15.75■□□□□ 0.11
HPS4Q9NQG7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 AL136379.1-201ENST00000623471 2642 ntBASIC15.75■□□□□ 0.11
HPS4Q9NQG7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.75■□□□□ 0.11
HPS4Q9NQG7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 AC018735.1-201ENST00000437208 1502 ntBASIC15.74■□□□□ 0.11
HPS4Q9NQG7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 AL645937.2-201ENST00000396808 931 ntBASIC15.74■□□□□ 0.11
HPS4Q9NQG7 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 CALR4P-201ENST00000431943 946 ntBASIC15.74■□□□□ 0.11
HPS4Q9NQG7 EIF3FP3-201ENST00000434851 1086 ntBASIC15.74■□□□□ 0.11
HPS4Q9NQG7 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms