Protein–RNA interactions for Protein: Q9HCN4

GPN1, GPN-loop GTPase 1, humanhuman

Predicted RBP Predictions only

Length 374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1Q9HCN4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
GPN1Q9HCN4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.96□□□□□ -0.33
GPN1Q9HCN4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.96□□□□□ -0.33
GPN1Q9HCN4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC12.96□□□□□ -0.33
GPN1Q9HCN4 AC022616.7-201ENST00000525383 220 ntBASIC12.96□□□□□ -0.33
GPN1Q9HCN4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC12.96□□□□□ -0.33
GPN1Q9HCN4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC12.96□□□□□ -0.33
GPN1Q9HCN4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.96□□□□□ -0.33
GPN1Q9HCN4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.96□□□□□ -0.33
GPN1Q9HCN4 AC099336.1-202ENST00000602961 463 ntBASIC12.96□□□□□ -0.33
GPN1Q9HCN4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.96□□□□□ -0.33
GPN1Q9HCN4 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.96□□□□□ -0.33
GPN1Q9HCN4 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
GPN1Q9HCN4 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
GPN1Q9HCN4 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
GPN1Q9HCN4 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GPN1Q9HCN4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GPN1Q9HCN4 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
GPN1Q9HCN4 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
GPN1Q9HCN4 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
GPN1Q9HCN4 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.96□□□□□ -0.34
GPN1Q9HCN4 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
GPN1Q9HCN4 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
GPN1Q9HCN4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
GPN1Q9HCN4 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
GPN1Q9HCN4 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.34
GPN1Q9HCN4 AC016397.2-201ENST00000624848 1985 ntBASIC12.96□□□□□ -0.34
GPN1Q9HCN4 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
GPN1Q9HCN4 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
GPN1Q9HCN4 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
GPN1Q9HCN4 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
GPN1Q9HCN4 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.96□□□□□ -0.34
GPN1Q9HCN4 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
GPN1Q9HCN4 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 AC007787.1-201ENST00000588095 1583 ntBASIC12.95□□□□□ -0.34
GPN1Q9HCN4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 AC022447.6-201ENST00000515522 438 ntBASIC12.95□□□□□ -0.34
GPN1Q9HCN4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GPN1Q9HCN4 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GPN1Q9HCN4 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
GPN1Q9HCN4 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GPN1Q9HCN4 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.94□□□□□ -0.34
GPN1Q9HCN4 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.94□□□□□ -0.34
GPN1Q9HCN4 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GPN1Q9HCN4 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
GPN1Q9HCN4 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.94□□□□□ -0.34
GPN1Q9HCN4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GPN1Q9HCN4 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GPN1Q9HCN4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.94□□□□□ -0.34
GPN1Q9HCN4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
GPN1Q9HCN4 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms