Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SH2D4AQ9H788 AL513477.1-201ENST00000602865 2407 ntBASIC17.67■□□□□ 0.42
SH2D4AQ9H788 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SH2D4AQ9H788 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 CICP11-201ENST00000434745 2827 ntBASIC17.66■□□□□ 0.42
SH2D4AQ9H788 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 ZNF767P-206ENST00000513792 565 ntBASIC17.66■□□□□ 0.42
SH2D4AQ9H788 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 AL139099.5-201ENST00000635274 300 ntBASIC17.66■□□□□ 0.42
SH2D4AQ9H788 KRT8P4-201ENST00000509735 1454 ntBASIC17.66■□□□□ 0.42
SH2D4AQ9H788 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 CLUHP2-201ENST00000426660 1303 ntBASIC17.66■□□□□ 0.42
SH2D4AQ9H788 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.66■□□□□ 0.42
SH2D4AQ9H788 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SH2D4AQ9H788 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SH2D4AQ9H788 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.65■□□□□ 0.42
SH2D4AQ9H788 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SH2D4AQ9H788 REXO1L4P-201ENST00000605109 1937 ntBASIC17.65■□□□□ 0.42
SH2D4AQ9H788 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.65■□□□□ 0.42
SH2D4AQ9H788 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH2D4AQ9H788 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.65■□□□□ 0.42
SH2D4AQ9H788 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH2D4AQ9H788 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SH2D4AQ9H788 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH2D4AQ9H788 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SH2D4AQ9H788 AC026434.2-201ENST00000506094 1078 ntBASIC17.65■□□□□ 0.42
SH2D4AQ9H788 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH2D4AQ9H788 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.65■□□□□ 0.42
SH2D4AQ9H788 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SH2D4AQ9H788 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.65■□□□□ 0.42
SH2D4AQ9H788 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH2D4AQ9H788 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SH2D4AQ9H788 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH2D4AQ9H788 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH2D4AQ9H788 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
SH2D4AQ9H788 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SH2D4AQ9H788 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH2D4AQ9H788 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.65■□□□□ 0.42
SH2D4AQ9H788 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH2D4AQ9H788 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
SH2D4AQ9H788 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
SH2D4AQ9H788 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
SH2D4AQ9H788 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SH2D4AQ9H788 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.64■□□□□ 0.41
SH2D4AQ9H788 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms