Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.49■□□□□ 0.23
HIPK3Q9H422 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HIPK3Q9H422 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
HIPK3Q9H422 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.49■□□□□ 0.23
HIPK3Q9H422 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HIPK3Q9H422 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
HIPK3Q9H422 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIPK3Q9H422 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.49■□□□□ 0.23
HIPK3Q9H422 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.49■□□□□ 0.23
HIPK3Q9H422 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.49■□□□□ 0.23
HIPK3Q9H422 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIPK3Q9H422 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.49■□□□□ 0.23
HIPK3Q9H422 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
HIPK3Q9H422 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.49■□□□□ 0.23
HIPK3Q9H422 AC026691.1-201ENST00000602502 2017 ntBASIC16.49■□□□□ 0.23
HIPK3Q9H422 AC138696.2-201ENST00000607376 223 ntBASIC16.49■□□□□ 0.23
HIPK3Q9H422 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HIPK3Q9H422 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIPK3Q9H422 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIPK3Q9H422 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.49■□□□□ 0.23
HIPK3Q9H422 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIPK3Q9H422 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIPK3Q9H422 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIPK3Q9H422 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIPK3Q9H422 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIPK3Q9H422 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.49■□□□□ 0.23
HIPK3Q9H422 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HIPK3Q9H422 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIPK3Q9H422 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIPK3Q9H422 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.49■□□□□ 0.23
HIPK3Q9H422 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HIPK3Q9H422 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.48■□□□□ 0.23
HIPK3Q9H422 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIPK3Q9H422 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HIPK3Q9H422 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIPK3Q9H422 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HIPK3Q9H422 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIPK3Q9H422 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.48■□□□□ 0.23
HIPK3Q9H422 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIPK3Q9H422 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIPK3Q9H422 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HIPK3Q9H422 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HIPK3Q9H422 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.48■□□□□ 0.23
HIPK3Q9H422 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HIPK3Q9H422 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.48■□□□□ 0.23
HIPK3Q9H422 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
HIPK3Q9H422 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIPK3Q9H422 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIPK3Q9H422 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.48■□□□□ 0.23
HIPK3Q9H422 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HIPK3Q9H422 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HIPK3Q9H422 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.48■□□□□ 0.23
HIPK3Q9H422 VDAC1P1-201ENST00000439229 848 ntBASIC16.48■□□□□ 0.23
HIPK3Q9H422 RN7SL8P-201ENST00000461771 266 ntBASIC16.48■□□□□ 0.23
HIPK3Q9H422 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HIPK3Q9H422 HLA-J-204ENST00000495278 958 ntBASIC16.48■□□□□ 0.23
HIPK3Q9H422 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.48■□□□□ 0.23
HIPK3Q9H422 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.48■□□□□ 0.23
HIPK3Q9H422 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.48■□□□□ 0.23
HIPK3Q9H422 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HIPK3Q9H422 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.48■□□□□ 0.23
HIPK3Q9H422 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HIPK3Q9H422 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIPK3Q9H422 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HIPK3Q9H422 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIPK3Q9H422 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HIPK3Q9H422 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HIPK3Q9H422 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.48■□□□□ 0.23
HIPK3Q9H422 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HIPK3Q9H422 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIPK3Q9H422 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIPK3Q9H422 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HIPK3Q9H422 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HIPK3Q9H422 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.47■□□□□ 0.23
HIPK3Q9H422 AL360270.3-201ENST00000609118 1348 ntBASIC16.47■□□□□ 0.23
HIPK3Q9H422 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HIPK3Q9H422 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
HIPK3Q9H422 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.47■□□□□ 0.23
HIPK3Q9H422 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.47■□□□□ 0.23
HIPK3Q9H422 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.47■□□□□ 0.23
HIPK3Q9H422 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
HIPK3Q9H422 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
HIPK3Q9H422 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIPK3Q9H422 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms