Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 AL512361.1-201ENST00000554200 418 ntBASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 SPDYE12P-201ENST00000618416 771 ntBASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 AC073592.8-201ENST00000624126 511 ntBASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 AF228730.6-201ENST00000641497 218 ntBASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 AC084121.3-201ENST00000641716 218 ntBASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 AC018529.2-202ENST00000611482 3087 ntBASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J3Q9H1A7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 SNHG9-202ENST00000564014 471 ntBASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 LINC01115-203ENST00000606068 577 ntBASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 AL138828.2-201ENST00000615812 383 ntBASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.11□□□□□ -0.15
POLR2J3Q9H1A7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
POLR2J3Q9H1A7 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms