Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRIM2Q9C040 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM2Q9C040 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.05□□□□□ -0.16
TRIM2Q9C040 SERBP1P5-201ENST00000510079 1181 ntBASIC14.05□□□□□ -0.16
TRIM2Q9C040 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
TRIM2Q9C040 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM2Q9C040 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.05□□□□□ -0.16
TRIM2Q9C040 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.05□□□□□ -0.16
TRIM2Q9C040 AC105233.6-201ENST00000642093 218 ntBASIC14.05□□□□□ -0.16
TRIM2Q9C040 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 AC106881.1-201ENST00000605849 3329 ntBASIC14.05□□□□□ -0.16
TRIM2Q9C040 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM2Q9C040 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRIM2Q9C040 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRIM2Q9C040 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TRIM2Q9C040 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRIM2Q9C040 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM2Q9C040 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM2Q9C040 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM2Q9C040 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM2Q9C040 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TRIM2Q9C040 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM2Q9C040 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.04□□□□□ -0.16
TRIM2Q9C040 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.04□□□□□ -0.16
TRIM2Q9C040 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.04□□□□□ -0.16
TRIM2Q9C040 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRIM2Q9C040 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.04□□□□□ -0.16
TRIM2Q9C040 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.04□□□□□ -0.16
TRIM2Q9C040 AC135586.1-201ENST00000539323 574 ntBASIC14.04□□□□□ -0.16
TRIM2Q9C040 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.04□□□□□ -0.16
TRIM2Q9C040 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM2Q9C040 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.04□□□□□ -0.16
TRIM2Q9C040 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM2Q9C040 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.04□□□□□ -0.16
TRIM2Q9C040 SRD5A3P1-201ENST00000603021 949 ntBASIC14.04□□□□□ -0.16
TRIM2Q9C040 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.04□□□□□ -0.16
TRIM2Q9C040 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.04□□□□□ -0.16
TRIM2Q9C040 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.04□□□□□ -0.16
TRIM2Q9C040 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.04□□□□□ -0.16
TRIM2Q9C040 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TRIM2Q9C040 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM2Q9C040 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
TRIM2Q9C040 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
TRIM2Q9C040 AC007787.1-201ENST00000588095 1583 ntBASIC14.04□□□□□ -0.16
TRIM2Q9C040 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM2Q9C040 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM2Q9C040 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.04□□□□□ -0.16
TRIM2Q9C040 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.04□□□□□ -0.16
TRIM2Q9C040 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TRIM2Q9C040 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM2Q9C040 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TRIM2Q9C040 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms