Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AC097359.2-201ENST00000604992 2389 ntBASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 MTHFR-210ENST00000641407 2387 ntBASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 AC092123.2-201ENST00000611189 5421 ntBASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 ZBTB45P2-201ENST00000452245 1531 ntBASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 PCDHGB8P-201ENST00000502926 1973 ntBASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 LINC02139-201ENST00000612023 2005 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 MST1P2-201ENST00000457982 2291 ntBASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LCE3DQ9BYE3 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 FAM95B1-212ENST00000592873 4692 ntBASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms